RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MORF4L2Q15014 288 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 DCAF8Q5TAQ9 597 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 LPCAT4Q643R3 524 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 TREML1Q86YW5 311 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 ULK2Q8IYT8 1036 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 OGFOD1Q8N543 542 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 DNAJC1Q96KC8 554 aaKnown RBP10.77□□□□□ -0.68
LMX1A-201ENST00000294816 ACAP3Q96P50 834 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 SHCBP1LQ9BZQ2 653 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 ZWILCHQ9H900 591 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 SERPINA10Q9UK55 444 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 DOT1LQ8TEK3 1739 aa10.77□□□□□ -0.68
LMX1A-201ENST00000294816 CLUHO75153 1309 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 PSTPIP1O43586 416 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 OR6B1O95007 311 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 NDUFB10O96000 172 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 INHBAP08476 426 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 CFHP08603 1231 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 RXRBP28702 533 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 SLC18A1P54219 525 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 PTK7Q13308 1070 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 MED21Q13503 144 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 EFHC2Q5JST6 749 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 SPDYAQ5MJ70 313 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 ANKRD22Q5VYY1 191 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 TMPRSS6Q8IU80 811 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 NME8Q8N427 588 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 ABTB1Q969K4 478 aaPredicted RBP10.77□□□□□ -0.69
LMX1A-201ENST00000294816 PPP2R3CQ969Q6 453 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 FAM81BQ96LP2 452 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 PHACTR1Q9C0D0 580 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 VPS11Q9H270 941 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 ZNF395Q9H8N7 513 aaPredicted RBP10.77□□□□□ -0.69
LMX1A-201ENST00000294816 KCNK13Q9HB14 408 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 AGTPBP1Q9UPW5 1226 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 E5RJQ4 531 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 TM9SF1O15321 606 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 GRIN3BO60391 1043 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 ATP2B4P23634 1241 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 IRX4P78413 519 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 BASP1P80723 227 aaKnown RBP10.77□□□□□ -0.69
LMX1A-201ENST00000294816 ASPHQ12797 758 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 ALCAMQ13740 583 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 MSS51Q4VC12 460 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 FNBP1LQ5T0N5 605 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 SATL1Q86VE3 508 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 ALLCQ8N6M5 410 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 GSTCDQ8NEC7 633 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 EXD1Q8NHP7 514 aa10.77□□□□□ -0.69
LMX1A-201ENST00000294816 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.69
LMX1A-201ENST00000294816 MMADHCQ9H3L0 296 aaPredicted RBP10.77□□□□□ -0.69
LMX1A-201ENST00000294816 SPATA31A5Q5VU36 1347 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SPATA31A6Q5VVP1 1343 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SPATA31A7Q8IWB4 1347 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 ZNF335Q9H4Z2 1342 aaPredicted RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 DLDP09622 509 aaKnown RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SERPINB6P35237 376 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 KLHL38Q2WGJ6 581 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 TRMT5Q32P41 509 aaKnown RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 GRAMD1BQ3KR37 738 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SPOPLQ6IQ16 392 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SV2AQ7L0J3 742 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 KATNAL2Q8IYT4 538 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 BANPQ8N9N5 519 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SHKBP1Q8TBC3 707 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 TRIM11Q96F44 468 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 IWS1Q96ST2 819 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SLC13A1Q9BZW2 595 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 CYP4F11Q9HBI6 524 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 TMEM8AQ9HCN3 771 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SLC7A8Q9UHI5 535 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 LAMB2P55268 1798 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 KAT6AQ92794 2004 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 IPO5O00410 1097 aaKnown RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 FAM200BP0CF97 657 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 VAV1P15498 845 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 FAAP100Q0VG06 881 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 RNASEH2BQ5TBB1 312 aaKnown RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 DCUN1D2Q6PH85 259 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 NAT14Q8WUY8 206 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 USP6NLQ92738 828 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 CCDC17Q96LX7 622 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 WDR11Q9BZH6 1224 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 TCEAL9Q9UHQ7 104 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 COMMD3-BMI1R4GMX3 469 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 DENND3A2RUS2 1198 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 COPEO14579 308 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 POLR2MP0CAP2 368 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 UNGP13051 313 aaPredicted RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 DSG3P32926 999 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 RPL7AP62424 266 aaKnown RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 MYBPC2Q14324 1141 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 KRT72Q14CN4 511 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 DOK7Q18PE1 504 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 MMEL1Q495T6 779 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 CEP55Q53EZ4 464 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 MEX3CQ5U5Q3 659 aaKnown RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 CDC42EP5Q6NZY7 148 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms