RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 COPS5Q92905 334 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 MCUR1Q96AQ8 359 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 CAPNS2Q96L46 248 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 MIPEPQ99797 713 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 MROH8Q9H579 483 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 SLCO1B3Q9NPD5 702 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 DDX43Q9NXZ2 648 aaKnown RBP11.07□□□□□ -0.64
ERCC3-201ENST00000285398 IL1RAPL1Q9NZN1 696 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.07□□□□□ -0.64
ERCC3-201ENST00000285398 TCRBV7S2A1N4TA0A589 114 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 GYG2O15488 501 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 ZSCAN9O15535 394 aaPredicted RBP11.06□□□□□ -0.64
ERCC3-201ENST00000285398 KRT36O76013 467 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 GAS8O95995 478 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 LYNP07948 512 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 CTGFP29279 349 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 FMO5P49326 533 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 CAP1Q01518 475 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 MESDQ14696 234 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 FAM110CQ1W6H9 321 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 SH2D4BQ5SQS7 431 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 DPP9Q86TI2 863 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 STKLD1Q8NE28 680 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 OLFM3Q96PB7 478 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 HAPLN3Q96S86 360 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 LXNQ9BS40 222 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 BHMT2Q9H2M3 363 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 MMADHCQ9H3L0 296 aaPredicted RBP11.06□□□□□ -0.64
ERCC3-201ENST00000285398 SENP1Q9P0U3 644 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 DNAJC25-GNG10A0A024R161 153 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 A8MXQ7 604 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 CLIC2O15247 247 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 GSC2O15499 205 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 KCNA2P16389 499 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 ITGA8P53708 1063 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 CCNA1P78396 465 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 TMED2Q15363 201 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 DEFB115Q30KQ5 88 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 SGO2Q562F6 1265 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 CEP128Q6ZU80 1094 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 MIER3Q7Z3K6 550 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 MTDHQ86UE4 582 aaKnown RBP11.06□□□□□ -0.64
ERCC3-201ENST00000285398 NLRX1Q86UT6 975 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 FAM186BQ8IYM0 893 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 VPS52Q8N1B4 723 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 DENND1AQ8TEH3 1009 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 GRK7Q8WTQ7 553 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 CD101Q93033 1021 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 PLEKHG4BQ96PX9 1271 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 HSD17B14Q9BPX1 270 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 METTL5Q9NRN9 209 aaKnown RBP11.06□□□□□ -0.64
ERCC3-201ENST00000285398 ANAPC5Q9UJX4 755 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 ANGPTL2Q9UKU9 493 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 DOCK5Q9H7D0 1870 aa11.06□□□□□ -0.64
ERCC3-201ENST00000285398 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 TGFB1I1O43294 461 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 SPOPO43791 374 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 FTLP02792 175 aaPredicted RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 ATF2P15336 505 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 PSMC2P35998 433 aaKnown RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 MYBPC3Q14896 1274 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 NFIL3Q16649 462 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 CTC1Q2NKJ3 1217 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 PRAMEF19Q5SWL8 479 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 ARHGAP24Q8N264 748 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 DNERQ8NFT8 737 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 SPOCK2Q92563 424 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 MAML1Q92585 1016 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 SMC6Q96SB8 1091 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 MKNK1Q9BUB5 465 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 DNAJC17Q9NVM6 304 aaKnown RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 GALNT8Q9NY28 637 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 EURLQ9NYK6 297 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 MORF4L1Q9UBU8 362 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 APEX2Q9UBZ4 518 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 SLC45A1Q9Y2W3 748 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 MTA2O94776 668 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 UBTFL6P0CB48 400 aaPredicted RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 BCRP11274 1271 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 UBA1P22314 1058 aaKnown RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 RPA1P27694 616 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 LSAMPQ13449 338 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 PTK6Q13882 451 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 CCL14Q16627 93 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 LIN52Q52LA3 116 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 TRABD2AQ86V40 505 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 RELL1Q8IUW5 271 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 BBOF1Q8ND07 529 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 NPLOC4Q8TAT6 608 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 LZICQ8WZA0 190 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 INTS2Q9H0H0 1204 aaKnown RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 DNAAF2Q9NVR5 837 aaKnown RBP11.05□□□□□ -0.64
ERCC3-201ENST00000285398 TCEAL9Q9UHQ7 104 aa11.05□□□□□ -0.64
ERCC3-201ENST00000285398 DNM3Q9UQ16 869 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms