RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SLITRK2Q9H156 845 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 CAAP1Q9H8G2 361 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 TRMT6Q9UJA5 497 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 MYH11P35749 1972 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 H3BMM5 538 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 VWA5AO00534 786 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 QARSP47897 775 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 CDK8P49336 464 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 CAMK2GQ13555 558 aaPredicted RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 GALNTL6Q49A17 601 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 KIAA0408Q6ZU52 694 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 VPS33AQ96AX1 596 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 TRIM39Q9HCM9 518 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 JPH1Q9HDC5 661 aaPredicted RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 IL18RAPO95256 599 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ZNF512Q96ME7 567 aaPredicted RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ANKRD27Q96NW4 1050 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 CATSPER2Q96P56 530 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 HOXC10Q9NYD6 342 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 AGO2Q9UKV8 859 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 WWP2O00308 870 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 TM9SF1O15321 606 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ERVK-10P10266 1014 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 CDC25AP30304 524 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 SERPINB8P50452 374 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ZCWPW2Q504Y3 356 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 CYFIP1Q7L576 1253 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ZNF473Q8WTR7 871 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 PSMD14O00487 310 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 EIF2B2P49770 351 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 REXO4Q9GZR2 422 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 SH3BP1Q9Y3L3 701 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 NEU2Q9Y3R4 380 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 PNMA8CA0A1B0GUJ8 204 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 SARSP49591 514 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 RESTQ13127 1097 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 KCNV1Q6PIU1 500 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 GLYCTKQ8IVS8 523 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 SEC16BQ96JE7 1060 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ILKAPQ9H0C8 392 aaPredicted RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 SH3BP4Q9P0V3 963 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 LINC00854A0A1B0GVQ3 168 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 PRRG1O14668 218 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 S100GP29377 79 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ZCCHC8Q6NZY4 707 aaKnown RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 ZNF589Q86UQ0 364 aaPredicted RBP9.07□□□□□ -0.96
NIPBL-201ENST00000282516 MCEEQ96PE7 176 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 RSAD1Q9HA92 442 aa9.07□□□□□ -0.96
NIPBL-201ENST00000282516 POLR1AO95602 1720 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ZNF682O95780 498 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 SLC2A3P11169 496 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ERFP50548 548 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 PRMT9Q6P2P2 845 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 BNC2Q6ZN30 1099 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 MMP19Q99542 508 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 UBE2OQ9C0C9 1292 aaKnown RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 CAPN10Q9HC96 672 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 TRIM43BA6NCK2 446 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 SLC26A4O43511 780 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 STX11O75558 287 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 MED26O95402 600 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 USP17L8P0C7I0 530 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 GYS1P13807 737 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 MZF1P28698 734 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 CHI3L2Q15782 390 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 UNC45BQ8IWX7 931 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 SPATA18Q8TC71 538 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 RNF112Q9ULX5 631 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 RPN2P04844 631 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 CDC16Q13042 620 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 AGAP9Q5VTM2 703 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 RAB6BQ9NRW1 208 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 SLC39A10Q9ULF5 831 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 VPS26AO75436 327 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 RFX3P48380 749 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 BCAP31P51572 246 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 RAD23AP54725 363 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 FBXW10Q5XX13 1052 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 CACTIN-AS1Q8N1I8 211 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ZBTB1Q9Y2K1 713 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 A0A087WWV3 80 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 KPNA4O00629 521 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ACADSBP45954 432 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 CACNB2Q08289 660 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 PCSK7Q16549 785 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 OTOAQ7RTW8 1153 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 UXS1Q8NBZ7 420 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 IPMKQ8NFU5 416 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ZFRQ96KR1 1074 aaKnown RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 CCDC3Q9BQI4 270 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 GNG14A0A1W2PPG7 69 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 TMEM120BA0PK00 339 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 USP17L5A8MUK1 530 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ANKRD65E5RJM6 399 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 DDHD2O94830 711 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms