RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 SCUBE3Q8IX30 993 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 STRA6Q9BX79 667 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ASB7Q9H672 318 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.47□□□□□ -0.893e-7■□□□□ 9.2
SEC16A-201ENST00000277537 TXNDC16Q9P2K2 825 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 CPSF3Q9UKF6 684 aaKnown RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ATG7O95352 703 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 C22orf31O95567 290 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 C1QBPQ07021 282 aaKnown RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 TAF12Q16514 161 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 MFSD7Q6UXD7 560 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 CRELD2Q6UXH1 353 aaPredicted RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 METTL23Q86XA0 190 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 CEP57Q86XR8 500 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 SCN4BQ8IWT1 228 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ZBED8Q8IZ13 594 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 PRELID2Q8N945 189 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 PPP1R14CQ8TAE6 165 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 GDAP1Q8TB36 358 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 RAET1EQ8TD07 263 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 GPR88Q9GZN0 384 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 NXF3Q9H4D5 531 aaKnown RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 TREHO43280 583 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 CNMDO75829 334 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 YY1P25490 414 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 EIF3EP60228 445 aaKnown RBP9.46□□□□□ -0.89
SEC16A-201ENST00000277537 CDC42EP1Q00587 391 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 MBTD1Q05BQ5 628 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 MCL1Q07820 350 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 LRRC14Q15048 493 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 DCAF4L1Q3SXM0 396 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 SRRM1Q8IYB3 904 aaKnown RBP9.46□□□□□ -0.89
SEC16A-201ENST00000277537 C1orf127Q8N9H9 656 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 NPLOC4Q8TAT6 608 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 PYROXD1Q8WU10 500 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 TMEM121Q9BTD3 319 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.89
SEC16A-201ENST00000277537 SEMA4AQ9H3S1 761 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 GOLGA2P5Q9HBQ8 144 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 UBQLN1Q9UMX0 589 aaKnown RBP9.46□□□□□ -0.89
SEC16A-201ENST00000277537 MROH7Q68CQ1 1323 aa9.46□□□□□ -0.89
SEC16A-201ENST00000277537 SLC15A5A6NIM6 579 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 MICAL2O94851 1124 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 RPL21P46778 160 aaKnown RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 TAS2R40P59535 323 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 GHRHRQ02643 423 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 TAP1Q03518 808 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 PDIA2Q13087 525 aaKnown RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 SPOUT1Q5T280 376 aaKnown RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 TSHZ1Q6ZSZ6 1077 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 ANKRD23Q86SG2 305 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 CROCCP2Q86T23 111 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 ANKS4BQ8N8V4 417 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 C18orf25Q96B23 403 aaPredicted RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 TNIP3Q96KP6 325 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 GDF3Q9NR23 364 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 WDR35Q9P2L0 1181 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 PPME1Q9Y570 386 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 FAM169AQ9Y6X4 670 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 LRRC37AA6NMS7 1700 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 DDX3YO15523 660 aaKnown RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 B3GAT3O94766 335 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 RBP3P10745 1247 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 VDRP11473 427 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 EIF3BP55884 814 aaKnown RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 RGMBQ6NW40 437 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 PDIK1LQ8N165 341 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 SPATA18Q8TC71 538 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 RXFP2Q8WXD0 754 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 TFAP2BQ92481 460 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 FAF2Q96CS3 445 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 RBM15Q96T37 977 aaKnown RBP eCLIP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 HAPLN2Q9GZV7 340 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 NACA2Q9H009 215 aa9.46□□□□□ -0.9
SEC16A-201ENST00000277537 DDX56Q9NY93 547 aaKnown RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 BARX2Q9UMQ3 279 aaPredicted RBP9.46□□□□□ -0.9
SEC16A-201ENST00000277537 DLEC1Q9Y238 1755 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 CASTOR2A6NHX0 329 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 STK10O94804 968 aaKnown RBP9.45□□□□□ -0.9
SEC16A-201ENST00000277537 CD4P01730 458 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 GHRP10912 638 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 EDNRBP24530 442 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 FLT3P36888 993 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 TAF6P49848 677 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 FCGRTP55899 365 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 TFDP2Q14188 446 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 TARBP2Q15633 366 aaKnown RBP9.45□□□□□ -0.9
SEC16A-201ENST00000277537 DCAF6Q58WW2 860 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 FBXO47Q5MNV8 452 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 HHATQ5VTY9 493 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 CEP128Q6ZU80 1094 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 RUBCNQ92622 972 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 EIF2AQ9BY44 585 aaKnown RBP9.45□□□□□ -0.9
SEC16A-201ENST00000277537 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 NRCAMQ92823 1304 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 E5RJQ4 531 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 STBD1O95210 358 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 SNAI1O95863 264 aaPredicted RBP9.45□□□□□ -0.9
SEC16A-201ENST00000277537 GPD1P21695 349 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms