RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 LRRTM3Q86VH5 581 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 MRPL43Q8N983 215 aaKnown RBP18.31■□□□□ 0.52
SKP2-201ENST00000274254 C12orf29Q8N999 325 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 EPS8L1Q8TE68 723 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 GDPD5Q8WTR4 605 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 HEXIM2Q96MH2 286 aaKnown RBP18.31■□□□□ 0.52
SKP2-201ENST00000274254 DNAI2Q9GZS0 605 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 ENTPD7Q9NQZ7 604 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 KIAA1257Q9ULG3 409 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 MYBPHLA2RUH7 354 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 C2orf71A6NGG8 1288 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 SOX1O00570 391 aaPredicted RBP18.3■□□□□ 0.52
SKP2-201ENST00000274254 ADAM12O43184 909 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 LPXNO60711 386 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 CXCL14O95715 111 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 CCDC172P0C7W6 258 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 VDRP11473 427 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 CYP11B1P15538 503 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 RPL17P18621 184 aaKnown RBP18.3■□□□□ 0.52
SKP2-201ENST00000274254 IRS1P35568 1242 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 PRKCIP41743 596 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 ARID5AQ03989 594 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
SKP2-201ENST00000274254 ASIC2Q16515 512 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 CCDC142Q17RM4 750 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 MYCBPAPQ8TBZ2 947 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 TFAP2BQ92481 460 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 ZSWIM1Q9BR11 485 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 GTF3C4Q9UKN8 822 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 CDY1Q9Y6F8 540 aa18.3■□□□□ 0.52
SKP2-201ENST00000274254 COL4A4P53420 1690 aaPredicted RBP18.3■□□□□ 0.52
SKP2-201ENST00000274254 GOLGA6L6A8MZA4 724 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 CALCAP01258 141 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 CNPP09543 421 aaKnown RBP18.29■□□□□ 0.52
SKP2-201ENST00000274254 OR4Q2P0C623 313 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 GNA15P30679 374 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 MAPRE1Q15691 268 aaKnown RBP18.29■□□□□ 0.52
SKP2-201ENST00000274254 MEA1Q16626 185 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 PLPP4Q5VZY2 271 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 WDR59Q6PJI9 974 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 GPIHBP1Q8IV16 184 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 DDX1Q92499 740 aaKnown RBP18.29■□□□□ 0.52
SKP2-201ENST00000274254 PANX2Q96RD6 677 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 LPIN3Q9BQK8 851 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 TTYH1Q9H313 450 aaPredicted RBP18.29■□□□□ 0.52
SKP2-201ENST00000274254 TMLHEQ9NVH6 421 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 NOCTQ9UK39 431 aaKnown RBP18.29■□□□□ 0.52
SKP2-201ENST00000274254 PCDHGC5Q9Y5F6 944 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 TRANK1O15050 2925 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 ATG2AQ2TAZ0 1938 aa18.29■□□□□ 0.52
SKP2-201ENST00000274254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 HIDE1A8MVS5 230 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 TEX28O15482 410 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 BRD2P25440 801 aaKnown RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 OR1D2P34982 312 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 PDE6CP51160 858 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 GSDMDP57764 484 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 ROR1Q01973 937 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 GPR17Q13304 367 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 RAB33AQ14088 237 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 SGO2Q562F6 1265 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 MDH1BQ5I0G3 518 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 HGSNATQ68CP4 663 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 ARHGAP17Q68EM7 881 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 NOP9Q86U38 636 aaKnown RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 DCP1BQ8IZD4 617 aaKnown RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 ZNF606Q8WXB4 792 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 PCED1BQ96HM7 432 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 SYT11Q9BT88 431 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 FAM49BQ9NUQ9 324 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 RFXAPO00287 272 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 O00370 1275 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 CD19P15391 556 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 NDUFV1P49821 464 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 SMARCB1Q12824 385 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 NFE2Q16621 373 aaPredicted RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 SLC39A12Q504Y0 691 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 PPP1R26Q5T8A7 1209 aaPredicted RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 PAQR9Q6ZVX9 377 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 MICAL1Q8TDZ2 1067 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 MYLPFQ96A32 169 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 CYFIP2Q96F07 1278 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 KLHL5Q96PQ7 755 aa18.28■□□□□ 0.52
SKP2-201ENST00000274254 HNRNPABQ99729 332 aaKnown RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 BZW2Q9Y6E2 419 aaKnown RBP18.28■□□□□ 0.52
SKP2-201ENST00000274254 PTPRDP23468 1912 aa18.27■□□□□ 0.52
SKP2-201ENST00000274254 THAP12O43422 761 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 ABLIM3O94929 683 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 CSPG5O95196 566 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 SERPING1P05155 500 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 CCDC130P13994 396 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 CPB1P15086 417 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 FECHP22830 423 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 CDK17Q00537 523 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 KLHL30Q0D2K2 578 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 STILQ15468 1287 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 CNGA2Q16280 664 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 TSR1Q2NL82 804 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 812.5 ms