RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SLITRK1Q96PX8 696 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 TUBGCP5Q96RT8 1024 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 SLC13A1Q9BZW2 595 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 KCNK13Q9HB14 408 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 TRAFD1O14545 582 aaPredicted RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 ZWINTO95229 277 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 PYGLP06737 847 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 RANBP1P43487 201 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 ALDH18A1P54886 795 aaKnown RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 CYP24A1Q07973 514 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 SGSM1Q2NKQ1 1148 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 KATNAL2Q8IYT4 538 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 TMEM161BQ8NDZ6 487 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 EXD1Q8NHP7 514 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 FNBP1Q96RU3 617 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 SAR1AQ9NR31 198 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 LNPEPQ9UIQ6 1025 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 C10orf71Q711Q0 1435 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 MAP3K6O95382 1288 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 HLA-DRAP01903 254 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 GSTT1P30711 240 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 MYBPC2Q14324 1141 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 HHIPL2Q6UWX4 724 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 TREML1Q86YW5 311 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 ZNF276Q8N554 614 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 GMCL1P1Q8NEA9 526 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 USP6NLQ92738 828 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 ZNF184Q99676 751 aaPredicted RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 EPAS1Q99814 870 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 WDR83Q9BRX9 315 aaKnown RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 TELO2Q9Y4R8 837 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 IKBKGQ9Y6K9 419 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 CYB561D2O14569 222 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 PSTPIP1O43586 416 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 RNF8O76064 485 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 STK10O94804 968 aaKnown RBP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 CDK16Q00536 496 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 OGDHQ02218 1023 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 FAAP100Q0VG06 881 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 DMP1Q13316 513 aaPredicted RBP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 DGKZQ13574 1117 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 SPOCD1Q6ZMY3 1216 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 IGDCC3Q8IVU1 814 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 ARID3BQ8IVW6 561 aaPredicted RBP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 OXNAD1Q96HP4 312 aaPredicted RBP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 TLE6Q9H808 572 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 SENP1Q9P0U3 644 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 TESPA1A2RU30 521 aaPredicted RBP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 TATDN1Q6P1N9 297 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 RBM15BQ8NDT2 890 aaKnown RBP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 FEZF2Q8TBJ5 459 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 ACTL9Q8TC94 416 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 RILPQ96NA2 401 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 ACAP3Q96P50 834 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 PTPRJQ12913 1337 aa13.55□□□□□ -0.24
COL8A1-202ENST00000273342 COL14A1Q05707 1796 aaKnown RBP13.55□□□□□ -0.24
COL8A1-202ENST00000273342 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 NOMO3P69849 1222 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 OTUD4Q01804 1114 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 PTK7Q13308 1070 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 MORF4L2Q15014 288 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 C1orf146Q5VVC0 180 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 ZCCHC23Q6ZST2 131 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CDHR3Q6ZTQ4 885 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 BANPQ8N9N5 519 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 FAM71DQ8N9W8 422 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CCDC124Q96CT7 223 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 SENP7Q9BQF6 1050 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 MRPL47Q9HD33 250 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 AVENQ9NQS1 362 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 PCSK1NQ9UHG2 260 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 MAGEA13PA6NCF6 341 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 ARHGAP42A6NI28 874 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 DHX15O43143 795 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 ECE2O60344 883 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 TMEM63AO94886 807 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CYP1A1P04798 512 aaPredicted RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 LYNP07948 512 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 DLDP09622 509 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 VCPP55072 806 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 LMNB2Q03252 620 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 AP1B1Q10567 949 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 MTMR1Q13613 665 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 KBTBD12Q3ZCT8 623 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 ZBTB41Q5SVQ8 909 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 RIPOR1Q6ZS17 1223 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms