RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 TRIM16LQ309B1 348 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 FBXO43Q4G163 708 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 MIB1Q86YT6 1006 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 TTLL11Q8NHH1 800 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 GRIN3AQ8TCU5 1115 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 CLIC6Q96NY7 704 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 DCTPP1Q9H773 170 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 MTMR4Q9NYA4 1195 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 CNTN3Q9P232 1028 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 WDR33Q9C0J8 1336 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 A0A0J9YVX5 310 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 ESYT3A0FGR9 886 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 C2orf74A8MZ97 194 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 CLOCKO15516 846 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 ZBTB11O95625 1053 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 ALOX12P18054 663 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 SP100P23497 879 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 CASP5P51878 434 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 SGCGQ13326 291 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 SLC9A5Q14940 896 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 PIK3AP1Q6ZUJ8 805 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 LNX2Q8N448 690 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 FAM26EQ8N5C1 309 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 THRSPQ92748 146 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 KRT35Q92764 455 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 ASH2LQ9UBL3 628 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 CPA4Q9UI42 421 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 PNMA8BQ9ULN7 279 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 POLHQ9Y253 713 aa9.29□□□□□ -0.92
CTDSPL-201ENST00000273179 UBR1Q8IWV7 1749 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 SHOXO15266 292 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 STX10O60499 249 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 CD4P01730 458 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 FAM228BP0C875 321 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ADSLP30566 484 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 APBA1Q02410 837 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 MADCAM1Q13477 382 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 CNGA2Q16280 664 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 HES5Q5TA89 166 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 FYB2Q5VWT5 728 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 MAEAQ7L5Y9 396 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 R3HCC1LQ7Z5L2 792 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 PLD6Q8N2A8 252 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 PRICKLE1Q96MT3 831 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 EYA3Q99504 573 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 TXNDC9O14530 226 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ADAM9Q13443 819 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 C16orf72Q14CZ0 275 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 GLE1Q53GS7 698 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 TATDN1Q6P1N9 297 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 LARP1Q6PKG0 1096 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 TRPM8Q7Z2W7 1104 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 HEATR4Q86WZ0 1026 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ZGPATQ8N5A5 531 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 TBCDQ9BTW9 1192 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 IMPG2Q9BZV3 1241 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ARMC1Q9NVT9 282 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 VPS51Q9UID3 782 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 V9GYQ6 96 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 FAM135BQ49AJ0 1406 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 TRAV20A0A0B4J274 112 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 KCNJ18B7U540 433 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 H0Y626 953 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ZBTB7BO15156 539 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 N4BP1O75113 896 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 SASH3O75995 380 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 TRIM16O95361 564 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ETS2P15036 469 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 CD86P42081 329 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 MSH2P43246 934 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 COASYQ13057 564 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 NR5A1Q13285 461 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 KCNJ12Q14500 433 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ZC2HC1CQ53FD0 456 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 CLEC2AQ6UVW9 174 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 KRT28Q7Z3Y7 464 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 FAM83AQ86UY5 434 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ZSCAN29Q8IWY8 852 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 CSGALNACT2Q8N6G5 542 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 LILRB4Q8NHJ6 448 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 LRRC20Q8TCA0 184 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 CABLES1Q8TDN4 633 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 DDX17Q92841 729 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 NYXQ9GZU5 481 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.28□□□□□ -0.925e-17■■■■■ 86
CTDSPL-201ENST00000273179 C12orf10Q9HB07 376 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 ETNK2Q9NVF9 386 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 INTS10Q9NVR2 710 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 PLEKHG1Q9ULL1 1385 aa9.28□□□□□ -0.92
CTDSPL-201ENST00000273179 FAM47DPA6NHR8 397 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 HMGN1P05114 100 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 FANCCQ00597 558 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 PTPN21Q16825 1174 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 RTKN2Q8IZC4 609 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 AFAP1L2Q8N4X5 818 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 SDCCAG3Q96C92 435 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 COX4I2Q96KJ9 171 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 CAMK1GQ96NX5 476 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms