RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 LRRC34Q8IZ02 419 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 WDTC1Q8N5D0 677 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 GLIS1Q8NBF1 620 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 BBOF1Q8ND07 529 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 ARHGEF2Q92974 986 aaKnown RBP13.62□□□□□ -0.23
CPSF6-201ENST00000266679 C9orf72Q96LT7 481 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 SERPINB12Q96P63 405 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 ZNF317Q96PQ6 595 aaPredicted RBP13.62□□□□□ -0.23
CPSF6-201ENST00000266679 CFHR5Q9BXR6 569 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 CEP83Q9Y592 693 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 GOLGA6L7A0A1B0GV03 622 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 H0YHG0 523 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 SLC25A27O95847 323 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 ALDH1A1P00352 501 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 ZSCAN5DPP0CG00 497 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 ETS1P14921 441 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 CREB1P16220 341 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 PROZP22891 400 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 INHBEP58166 350 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 TFDP1Q14186 410 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 CD99L2Q8TCZ2 262 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 PPP1R16BQ96T49 567 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 XYLT2Q9H1B5 865 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 TJP2Q9UDY2 1190 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 ZNF148Q9UQR1 794 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 LRRD1A4D1F6 860 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 ACKR2O00590 384 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 ATP2C2O75185 946 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 TJP3O95049 919 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 VIMP08670 466 aaKnown RBP13.61□□□□□ -0.23
CPSF6-201ENST00000266679 IGBP1P78318 339 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 LACTBP83111 547 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-201ENST00000266679 KCTD2Q14681 263 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 LRRC14Q15048 493 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 SPRED3Q2MJR0 410 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 Q3C1V9 767 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 PPP1R15BQ5SWA1 713 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 HIBCHQ6NVY1 386 aaPredicted RBP13.61□□□□□ -0.23
CPSF6-201ENST00000266679 EFCAB12Q6NXP0 572 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 CDT1Q9H211 546 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 PTPRHQ9HD43 1115 aa13.61□□□□□ -0.23
CPSF6-201ENST00000266679 NFICP08651 508 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 MBTD1Q05BQ5 628 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 TAF1CQ15572 869 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-201ENST00000266679 PTPN20Q4JDL3 420 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 ERO1BQ86YB8 467 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 ANKRD42Q8N9B4 389 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 CCDC197Q8NCU1 140 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 DYDC1Q8WWB3 177 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 OSBPL7Q9BZF2 842 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 ZNF518BQ9C0D4 1074 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 FZD8Q9H461 694 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 RPF1Q9H9Y2 349 aaKnown RBP13.6□□□□□ -0.23
CPSF6-201ENST00000266679 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 RBPJLQ9UBG7 517 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 TBK1Q9UHD2 729 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 PCDHGC3Q9UN70 934 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 AGTPBP1Q9UPW5 1226 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 TRIM17Q9Y577 477 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 hCG_1818297A0A087WSY0 165 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 TMEM120BA0PK00 339 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 TXNP10599 105 aaKnown RBP13.6□□□□□ -0.23
CPSF6-201ENST00000266679 CETPP11597 493 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 PSMA2P25787 234 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 ATP5DP30049 168 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 CDH5P33151 784 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-201ENST00000266679 GTF2A2P52657 109 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 CDH8P55286 799 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 YWHAEP62258 255 aaKnown RBP13.6□□□□□ -0.23
CPSF6-201ENST00000266679 LMNB2Q03252 620 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 TAP1Q03518 808 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 ACTN3Q08043 901 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-201ENST00000266679 VSTM1Q6UX27 236 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 TAX1BP1Q86VP1 789 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 CCDC13Q8IYE1 715 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 EXOC8Q8IYI6 725 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 ZCCHC9Q8N567 271 aaKnown RBP13.6□□□□□ -0.23
CPSF6-201ENST00000266679 JOSD2Q8TAC2 188 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 ZWILCHQ9H900 591 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 MLXIPLQ9NP71 852 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 SAYSD1Q9NPB0 183 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 KCNK9Q9NPC2 374 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 CYTH4Q9UIA0 394 aa13.6□□□□□ -0.23
CPSF6-201ENST00000266679 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
CPSF6-201ENST00000266679 B4GALT4O60513 344 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 CSDE1O75534 798 aaKnown RBP13.59□□□□□ -0.23
CPSF6-201ENST00000266679 PSMC4P43686 418 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 ARSEP51690 589 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 PIGHQ14442 188 aaPredicted RBP13.59□□□□□ -0.23
CPSF6-201ENST00000266679 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 ANKRD20A8PQ5CZ79 823 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 CYP4X1Q8N118 509 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 CNPY4Q8N129 248 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 ALLCQ8N6M5 410 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 RBM15Q96T37 977 aaKnown RBP eCLIP13.59□□□□□ -0.233e-8■■■□□ 18.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms