RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ALLCQ8N6M5 410 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 DENND1AQ8TEH3 1009 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 VTI1AQ96AJ9 217 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 FAM111AQ96PZ2 611 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 MIPEPQ99797 713 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 RNF19AQ9NV58 838 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 USH1CQ9Y6N9 552 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 PSTPIP1O43586 416 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 PSMA2P25787 234 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 MAN1A1P33908 653 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 MOGSQ13724 837 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 TMEM132AQ24JP5 1023 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 KHDC1Q4VXA5 237 aaKnown RBP17.67■□□□□ 0.42
SQLE-201ENST00000265896 RNF43Q68DV7 783 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 PLEKHA7Q6IQ23 1121 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 CTAGE3PQ8IX95 158 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 SCYL3Q8IZE3 742 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 MAIP1Q8WWC4 291 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 ST6GALNAC4Q9H4F1 302 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 ANKEF1Q9NU02 776 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 PIH1D1Q9NWS0 290 aaKnown RBP17.67■□□□□ 0.42
SQLE-201ENST00000265896 HEY2Q9UBP5 337 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 STBD1O95210 358 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 NR1H3Q13133 447 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
SQLE-201ENST00000265896 C15orf39Q6ZRI6 1047 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 ARL8BQ9NVJ2 186 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 SLC9A2Q9UBY0 812 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 DOCK5Q9H7D0 1870 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 TMEM191CA6NGB0 347 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 VWA5AO00534 786 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 LGR5O75473 907 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
SQLE-201ENST00000265896 TMEM191BP0C7N4 346 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 ALADP13716 330 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 KCNA2P16389 499 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 BGNP21810 368 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 SERPINB3P29508 390 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 CAV1Q03135 178 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 CRYMQ14894 314 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 DENND1BQ6P3S1 775 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 CENPUQ71F23 418 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 VSIG10LQ86VR7 867 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 WDTC1Q8N5D0 677 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 C10orf82Q8WW14 230 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 ATP6V0A1Q93050 837 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 CFAP36Q96G28 342 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 TXLNGQ9NUQ3 528 aa17.66■□□□□ 0.42
SQLE-201ENST00000265896 COL11A2P13942 1736 aaPredicted RBP17.65■□□□□ 0.42
SQLE-201ENST00000265896 EME2A4GXA9 379 aaPredicted RBP17.65■□□□□ 0.42
SQLE-201ENST00000265896 DGAT1O75907 488 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 LYPLA2O95372 231 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
SQLE-201ENST00000265896 CCNB1P14635 433 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 YWHAGP61981 247 aaKnown RBP eCLIP17.65■□□□□ 0.42
SQLE-201ENST00000265896 NBPF12Q5TAG4 269 aaPredicted RBP17.65■□□□□ 0.42
SQLE-201ENST00000265896 SAMD3Q8N6K7 520 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 RSAD2Q8WXG1 361 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 OSBPL1AQ9BXW6 950 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 SLC13A1Q9BZW2 595 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 CISHQ9NSE2 258 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 ARHGAP28Q9P2N2 729 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 KANSL3Q9P2N6 904 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 LRRC37AA6NMS7 1700 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 E2F8A0AVK6 867 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 MMP8P22894 467 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 CETN2P41208 172 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 VCPP55072 806 aaKnown RBP17.65■□□□□ 0.42
SQLE-201ENST00000265896 BMPR2Q13873 1038 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 PDK4Q16654 411 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 SGSM1Q2NKQ1 1148 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 C1orf228Q6PIY5 440 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 FBXO27Q8NI29 283 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 CPT1BQ92523 772 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 NAF1Q96HR8 494 aaKnown RBP17.65■□□□□ 0.42
SQLE-201ENST00000265896 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
SQLE-201ENST00000265896 IP6K2Q9UHH9 426 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 CYTH4Q9UIA0 394 aa17.65■□□□□ 0.42
SQLE-201ENST00000265896 F7P08709 466 aaPredicted RBP17.64■□□□□ 0.42
SQLE-201ENST00000265896 RPL22P35268 128 aaKnown RBP17.64■□□□□ 0.42
SQLE-201ENST00000265896 PTDSS1P48651 473 aaKnown RBP17.64■□□□□ 0.42
SQLE-201ENST00000265896 RCN2Q14257 317 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 PSMD6Q15008 389 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 CAPRIN2Q6IMN6 1127 aaKnown RBP17.64■□□□□ 0.42
SQLE-201ENST00000265896 SYDE1Q6ZW31 735 aaPredicted RBP17.64■□□□□ 0.42
SQLE-201ENST00000265896 RFX6Q8HWS3 928 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 ARFGAP1Q8N6T3 406 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 TRAPPC12Q8WVT3 735 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 PPP1R12CQ9BZL4 782 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 GPATCH2LQ9NWQ4 482 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 RABGEF1Q9UJ41 708 aa17.64■□□□□ 0.42
SQLE-201ENST00000265896 FAM237BA0A1B0GVD1 139 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 KRT36O76013 467 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 ALDH3A1P30838 453 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 SFNP31947 248 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 CDKN2BP42772 138 aa17.64■□□□□ 0.41
SQLE-201ENST00000265896 TMEM192Q8IY95 271 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms