RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 DCAF6Q58WW2 860 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 RNF207Q6ZRF8 634 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 DHDDSQ86SQ9 333 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 SLC13A5Q86YT5 568 aaPredicted RBP9.21□□□□□ -0.94
VAPB-201ENST00000265619 ANKRD35Q8N283 1001 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 ZNF512Q96ME7 567 aaPredicted RBP9.21□□□□□ -0.94
VAPB-201ENST00000265619 ZDHHC7Q9NXF8 308 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 SERPINB13Q9UIV8 391 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 FZD1Q9UP38 647 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 TMED5Q9Y3A6 229 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 TRIM17Q9Y577 477 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 PCDHA2Q9Y5H9 948 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 NOX1Q9Y5S8 564 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 PVALEFA0A1B0GWK0 134 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 RBP3P10745 1247 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 AP2B1P63010 937 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 ZBTB16Q05516 673 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 MTM1Q13496 603 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 ANKRD20A4Q4UJ75 823 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CCDC174Q6PII3 467 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CYFIP1Q7L576 1253 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 ZNF410Q86VK4 478 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CDAN1Q8IWY9 1227 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 RAD54LQ92698 747 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CCDC127Q96BQ5 260 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 PRMT6Q96LA8 375 aaPredicted RBP9.2□□□□□ -0.94
VAPB-201ENST00000265619 GPR88Q9GZN0 384 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 SMYD3Q9H7B4 428 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 TIMMDC1Q9NPL8 285 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 TMOD2Q9NZR1 351 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 TSC22D4Q9Y3Q8 395 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CASZ1Q86V15 1759 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 LRP5O75197 1615 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 FUOMA2VDF0 154 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 DDTLA6NHG4 134 aaPredicted RBP9.2□□□□□ -0.94
VAPB-201ENST00000265619 A8MXQ7 604 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 STAMBPO95630 424 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 TMEM253P0C7T8 217 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 NELFEP18615 380 aaKnown RBP9.2□□□□□ -0.94
VAPB-201ENST00000265619 KRT15P19012 456 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 HOXD13P35453 343 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 ASPHQ12797 758 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 RALGPS1Q5JS13 557 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 C3orf62Q6ZUJ4 267 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 AMIGO2Q86SJ2 522 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 NIM1KQ8IY84 436 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 ACTRT2Q8TDY3 377 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 USP33Q8TEY7 942 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 S100A14Q9HCY8 104 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 ANKFY1Q9P2R3 1169 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 DDX25Q9UHL0 483 aaKnown RBP9.2□□□□□ -0.94
VAPB-201ENST00000265619 CROTQ9UKG9 612 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 SH3PXD2BA1X283 911 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 TCEA3O75764 348 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 DLDP09622 509 aaKnown RBP9.2□□□□□ -0.94
VAPB-201ENST00000265619 MYL2P10916 166 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CDH2P19022 906 aaPredicted RBP9.2□□□□□ -0.94
VAPB-201ENST00000265619 NR2F2P24468 414 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 NAPAP54920 295 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CDK16Q00536 496 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CAMK2BQ13554 666 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CCNIQ14094 377 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 PDK1Q15118 436 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 RASA2Q15283 850 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CYP1B1Q16678 543 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 FAM26FQ5R3K3 315 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 CES4AQ5XG92 561 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 TTBK2Q6IQ55 1244 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 OGFOD2Q6N063 350 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 COA7Q96BR5 231 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 PRPF18Q99633 342 aaKnown RBP9.2□□□□□ -0.94
VAPB-201ENST00000265619 LRRC27Q9C0I9 530 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 TPK1Q9H3S4 243 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 MAGEF1Q9HAY2 307 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 RIC8AQ9NPQ8 531 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 SLC38A7Q9NVC3 462 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 GCNT4Q9P109 453 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 DOCK2Q92608 1830 aa9.2□□□□□ -0.94
VAPB-201ENST00000265619 DLEC1Q9Y238 1755 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 A0A088AWK7 358 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 EXOC1LA0A1B0GW35 172 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 YDJCA8MPS7 323 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 PRPF4O43172 522 aaKnown RBP eCLIP9.19□□□□□ -0.94
VAPB-201ENST00000265619 ADCY6O43306 1168 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 AKAP3O75969 853 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 SLC25A3Q00325 362 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 KCNA1Q09470 495 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 PEX6Q13608 980 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 PPP2R5BQ15173 497 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 DLGAP5Q15398 846 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 NET1Q7Z628 596 aaPredicted RBP9.19□□□□□ -0.94
VAPB-201ENST00000265619 GLIS1Q8NBF1 620 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
VAPB-201ENST00000265619 MTBPQ96DY7 904 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 CALML4Q96GE6 196 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 ZNF287Q9HBT7 754 aa9.19□□□□□ -0.94
VAPB-201ENST00000265619 ZFYVE28Q9HCC9 887 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms