RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 POLNQ7Z5Q5 900 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 SUGP1Q8IWZ8 645 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 SRRM1Q8IYB3 904 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 NLGN2Q8NFZ4 835 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 ZNF668Q96K58 619 aaPredicted RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 TPX2Q9ULW0 747 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 NAALADL1Q9UQQ1 740 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 EXOC1LA0A1B0GW35 172 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 ZBTB42B2RXF5 422 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 IL18RAPO95256 599 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 KRT7P08729 469 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 CREB1P16220 341 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 SF3A3Q12874 501 aaKnown RBP eCLIP10.86□□□□□ -0.67
LSG1-201ENST00000265245 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 HADHQ16836 314 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 WDTC1Q8N5D0 677 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 NKD2Q969F2 451 aaPredicted RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 DCPSQ96C86 337 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 ACSF2Q96CM8 615 aaPredicted RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 HAUS1Q96CS2 278 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 FZD8Q9H461 694 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 SMARCAD1Q9H4L7 1026 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 ACTL7BQ9Y614 415 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 A0A0G2JLL6 359 aaPredicted RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 CCDC189A1A4V9 331 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 TCP11X1B4DZS4 312 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 SGK1O00141 431 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 STX2P32856 288 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 CDKN2BP42772 138 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 WDR72Q3MJ13 1102 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 WDR78Q5VTH9 848 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 PPP1R21Q6ZMI0 780 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 PRRT2Q7Z6L0 340 aaPredicted RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 CEP120Q8N960 986 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 TRAPPC12Q8WVT3 735 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 LHX5Q9H2C1 402 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 PTPRHQ9HD43 1115 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 RASA4BC9J798 803 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 B4GALT5O43286 388 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 RASA4O43374 803 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 HBP1O60381 514 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 SNX3O60493 162 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 ITGAVP06756 1048 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 ZSCAN5DPP0CG00 497 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 PSMC1P62191 440 aaKnown RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 NR1H3Q13133 447 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 SPRED3Q2MJR0 410 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 PTPN20Q4JDL3 420 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 NUGGCQ68CJ6 796 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 TXNRD3NBQ6F5E7 133 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 DENND1BQ6P3S1 775 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 CDR2LQ86X02 465 aaPredicted RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 GLIS1Q8NBF1 620 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 GIMAP7Q8NHV1 300 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 PCDH9Q9HC56 1237 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 SLC40A1Q9NP59 571 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 MLXIPLQ9NP71 852 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 LCTP09848 1927 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 SIGLEC16A6NMB1 481 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 CXCL8P10145 99 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 PECAM1P16284 738 aaPredicted RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 RFC1P35251 1148 aaPredicted RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 CLCN3P51790 818 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 TMED2Q15363 201 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 OASLQ15646 514 aaKnown RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 EEF1DP3Q658K8 133 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 EFCAB12Q6NXP0 572 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 DLK2Q6UY11 383 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 ERO1BQ86YB8 467 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 FBXO16Q8IX29 292 aaPredicted RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 CDT1Q9H211 546 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 FGFR1OP2Q9NVK5 253 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 WDR35Q9P2L0 1181 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 SHOC2Q9UQ13 582 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 EFR3BQ9Y2G0 817 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 CXCL11O14625 94 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 SUN1O94901 812 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 GJB1P08034 283 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 TXNP10599 105 aaKnown RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 CENPUQ71F23 418 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 TRPM8Q7Z2W7 1104 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 CYP4X1Q8N118 509 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 FNIP1Q8TF40 1166 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 CKAP2Q8WWK9 683 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 MMP19Q99542 508 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 TMEM121Q9BTD3 319 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 ZWILCHQ9H900 591 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 KLC4Q9NSK0 619 aa10.85□□□□□ -0.67
LSG1-201ENST00000265245 USP15Q9Y4E8 981 aaPredicted RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.85□□□□□ -0.67
LSG1-201ENST00000265245 SIP14410 1827 aa10.84□□□□□ -0.67
LSG1-201ENST00000265245 AP1G2O75843 785 aa10.84□□□□□ -0.67
LSG1-201ENST00000265245 RASSF9O75901 435 aa10.84□□□□□ -0.67
LSG1-201ENST00000265245 GDAP1Q8TB36 358 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms