RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PIGHQ14442 188 aaPredicted RBP9.83□□□□□ -0.84
SSR3-201ENST00000265044 KIAA1841Q6NSI8 718 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 HDAC7Q8WUI4 952 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 TFAP2BQ92481 460 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 RBM41Q96IZ5 413 aaKnown RBP9.83□□□□□ -0.84
SSR3-201ENST00000265044 TRPV6Q9H1D0 765 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 PTPRHQ9HD43 1115 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 BTNL10A8MVZ5 291 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 I3L4J1 428 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 SGK1O00141 431 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 PAEPP09466 180 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 MARCKSL1P49006 195 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 TSPY1Q01534 308 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 ENPEPQ07075 957 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 TAX1BP1Q86VP1 789 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 FAM228AQ86W67 206 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 DDX42Q86XP3 938 aaKnown RBP eCLIP9.83□□□□□ -0.84
SSR3-201ENST00000265044 ZNF354CQ86Y25 554 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 GRK7Q8WTQ7 553 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 FERMT1Q9BQL6 677 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 CACNG4Q9UBN1 327 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 KIAA1257Q9ULG3 409 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 ZNF646O15015 1829 aaPredicted RBP9.83□□□□□ -0.84
SSR3-201ENST00000265044 ARHGEF37A1IGU5 675 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 OPA1O60313 960 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 TADA2AO75478 443 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 PROSCO94903 275 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 TJP3O95049 919 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 CENPCQ03188 943 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 C9orf57Q5W0N0 161 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 C11orf63Q6NUN7 778 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 C15orf39Q6ZRI6 1047 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 DEFB128Q7Z7B8 93 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 SCUBE3Q8IX30 993 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 PAF1Q8N7H5 531 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 VCPIP1Q96JH7 1222 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 MRPL45Q9BRJ2 306 aaKnown RBP9.83□□□□□ -0.84
SSR3-201ENST00000265044 TRIM51Q9BSJ1 452 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 ADAMTS10Q9H324 1103 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 SIX4Q9UIU6 781 aa9.83□□□□□ -0.84
SSR3-201ENST00000265044 H7C0C1 242 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 PPEF2O14830 753 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 GPR32O75388 356 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 KRT7P08729 469 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 PYGMP11217 842 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 RALAP11233 206 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 CCDC130P13994 396 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 HOXA11P31270 313 aaPredicted RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 ATP5OP48047 213 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 CDH6P55285 790 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 MAMLD1Q13495 774 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 WSCD1Q658N2 575 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 MMGT1Q8N4V1 131 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 TRPV1Q8NER1 839 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ZNF296Q8WUU4 475 aaPredicted RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 SNX27Q96L92 541 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 SENP8Q96LD8 212 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 OSBPL8Q9BZF1 889 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 DDX43Q9NXZ2 648 aaKnown RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 ATP8A1Q9Y2Q0 1164 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ZSCAN5CA6NGD5 496 aaPredicted RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 FAM155AB1AL88 458 aaPredicted RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 F8VP50 259 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 CYP1A2P05177 515 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 OAS2P29728 719 aaKnown RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 CTNNA1P35221 906 aaKnown RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 ASPAP45381 313 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 CARSP49589 748 aaKnown RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 NME3Q13232 169 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 BFSP2Q13515 415 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 SLC2A14Q8TDB8 520 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ELOVL4Q9GZR5 314 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 AVENQ9NQS1 362 aaPredicted RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 FAM114A2Q9NRY5 505 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 HMGXB4Q9UGU5 601 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 NCANO14594 1321 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 E5RJQ4 531 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 SKIP12755 728 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 KRT10P13645 584 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ATF2P15336 505 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 PROZP22891 400 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 PCSK1P29120 753 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 CHRNA3P32297 505 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 MAP2K2P36507 400 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 RAD23BP54727 409 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 BCAR1P56945 870 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 CNGA2Q16280 664 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 SLC13A5Q86YT5 568 aaPredicted RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 SLAIN1Q8ND83 568 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ACTRT1Q8TDG2 376 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ALG3Q92685 438 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ZMAT2Q96NC0 199 aaKnown RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 SLITRK6Q9H5Y7 841 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 HEY1Q9Y5J3 304 aa9.82□□□□□ -0.84
SSR3-201ENST00000265044 ZNFX1Q9P2E3 1918 aaKnown RBP9.82□□□□□ -0.84
SSR3-201ENST00000265044 MYO9BQ13459 2157 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 PODXLO00592 558 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 CILPO75339 1184 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms