RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
CTCF-201ENST00000264010 TCRBV7S2A1N4TA0A589 114 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 ATG7O95352 703 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 PPIL2Q13356 520 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 PLCB4Q15147 1175 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 TAS1R3Q7RTX0 852 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 EPS8L3Q8TE67 593 aaKnown RBP17.13■□□□□ 0.33
CTCF-201ENST00000264010 RAPGEF5Q92565 580 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 KIF12Q96FN5 646 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 APOL6Q9BWW8 343 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 PDLIM7Q9NR12 457 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 ITGB3P05106 788 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 CXCL8P10145 99 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 CA8P35219 290 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 PTGIRP43119 386 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 IL9RQ01113 521 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 PTK6Q13882 451 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 TFDP2Q14188 446 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 TTC27Q6P3X3 843 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.13■□□□□ 0.33
CTCF-201ENST00000264010 CDCA5Q96FF9 252 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 C9orf72Q96LT7 481 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 GPR20Q99678 358 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 TRIM7Q9C029 511 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 APOBEC3GQ9HC16 384 aaKnown RBP17.13■□□□□ 0.33
CTCF-201ENST00000264010 STYXL1Q9Y6J8 313 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 XPOTO43592 962 aaKnown RBP17.13■□□□□ 0.33
CTCF-201ENST00000264010 CYP1A1P04798 512 aaPredicted RBP17.13■□□□□ 0.33
CTCF-201ENST00000264010 STAG3L1P0CL83 205 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 KRT10P13645 584 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 BRAFP15056 766 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 COPS2P61201 443 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 GRM1Q13255 1194 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 DARS2Q6PI48 645 aaKnown RBP17.13■□□□□ 0.33
CTCF-201ENST00000264010 SERPINB12Q96P63 405 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
CTCF-201ENST00000264010 SUN1O94901 812 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 GJB6O95452 261 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 MON1BQ7L1V2 547 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 ART4Q93070 314 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 SMC6Q96SB8 1091 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 SMCHD1A6NHR9 2005 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 SRRM3A6NNA2 597 aaPredicted RBP17.12■□□□□ 0.33
CTCF-201ENST00000264010 CDH16O75309 829 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 INSRRP14616 1297 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
CTCF-201ENST00000264010 ARL4CP56559 192 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 NR1H3Q13133 447 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 C6orf163Q5TEZ5 329 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 LLGL2Q6P1M3 1020 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 SRRM1Q8IYB3 904 aaKnown RBP17.12■□□□□ 0.33
CTCF-201ENST00000264010 DDX1Q92499 740 aaKnown RBP17.12■□□□□ 0.33
CTCF-201ENST00000264010 HPDLQ96IR7 371 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 ELAC2Q9BQ52 826 aaKnown RBP17.12■□□□□ 0.33
CTCF-201ENST00000264010 TELO2Q9Y4R8 837 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 SIPA1L1O43166 1804 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 VNN1O95497 513 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 BAG2O95816 211 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 BASP1P80723 227 aaKnown RBP17.12■□□□□ 0.33
CTCF-201ENST00000264010 PYROXD1Q8WU10 500 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 COPS5Q92905 334 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 SGSM3Q96HU1 749 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 SLC4A7Q9Y6M7 1214 aa17.12■□□□□ 0.33
CTCF-201ENST00000264010 CYP1B1Q16678 543 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 SPOCD1Q6ZMY3 1216 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 CPNE8Q86YQ8 564 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 PDIK1LQ8N165 341 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 SNRNP27Q8WVK2 155 aaKnown RBP17.11■□□□□ 0.33
CTCF-201ENST00000264010 SLC40A1Q9NP59 571 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 HNRNPCP07910 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
CTCF-201ENST00000264010 ATP4AP20648 1035 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 ALDH3A1P30838 453 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 MAGEA4P43358 317 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 C9orf131Q5VYM1 1079 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 PLEKHA7Q6IQ23 1121 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 C12orf50Q8NA57 414 aaPredicted RBP17.11■□□□□ 0.33
CTCF-201ENST00000264010 NGRNQ9NPE2 291 aaKnown RBP17.11■□□□□ 0.33
CTCF-201ENST00000264010 NEU2Q9Y3R4 380 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.11■□□□□ 0.33
CTCF-201ENST00000264010 UMODL1Q5DID0 1318 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 MROH7Q68CQ1 1323 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 A0A087WZ62 844 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 RASA4BC9J798 803 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 RASA4O43374 803 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 CREB3O43889 395 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 TTC4O95801 387 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 SHBGP04278 402 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 MCF2P10911 925 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 CDO1Q16878 200 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 TFDP3Q5H9I0 405 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 FDXACB1Q9BRP7 624 aaPredicted RBP17.11■□□□□ 0.33
CTCF-201ENST00000264010 GCOM2Q9BZD3 368 aaPredicted RBP17.11■□□□□ 0.33
CTCF-201ENST00000264010 ZCWPW1Q9H0M4 648 aa17.11■□□□□ 0.33
CTCF-201ENST00000264010 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
CTCF-201ENST00000264010 SPDYE5A6NIY4 337 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 STBD1O95210 358 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms