RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TSSK1BQ9BXA7 367 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 XPNPEP1Q9NQW7 623 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 PXMP2Q9NR77 195 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 ARL8BQ9NVJ2 186 aa13.03□□□□□ -0.32
CHMP3-201ENST00000263856 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHMP3-201ENST00000263856 RBBP6Q7Z6E9 1792 aaKnown RBP13.02□□□□□ -0.32
CHMP3-201ENST00000263856 DPPA5A6NC42 116 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 SPDYE5A6NIY4 337 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 TCEA3O75764 348 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 CD48P09326 243 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 MARK3P27448 753 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 PHBP35232 272 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 TUBP50607 506 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.32
CHMP3-201ENST00000263856 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.32
CHMP3-201ENST00000263856 KPNB1Q14974 876 aaKnown RBP13.02□□□□□ -0.32
CHMP3-201ENST00000263856 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 TRIM55Q9BYV6 548 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 RNF146Q9NTX7 359 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 ANKEF1Q9NU02 776 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 DLGAP2Q9P1A6 1054 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 ACTL7BQ9Y614 415 aa13.02□□□□□ -0.32
CHMP3-201ENST00000263856 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 F5H423 210 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 STAM2O75886 525 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 TNFSF9P41273 254 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 SKIV2L2P42285 1042 aaKnown RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 CLNKQ7Z7G1 428 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 ZNF677Q86XU0 584 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 PDCD7Q8N8D1 485 aaKnown RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 DENND1AQ8TEH3 1009 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 CNKSR1Q969H4 720 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 MTMR12Q9C0I1 747 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 XPO7Q9UIA9 1087 aaKnown RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 NR3C2P08235 984 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 ESRRAP11474 423 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 SFNP31947 248 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 PTGER2P43116 358 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 ARL4CP56559 192 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 ZNF252P-AS1Q0IIN9 211 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 RNASEH2BQ5TBB1 312 aaKnown RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 CCDC62Q6P9F0 684 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-201ENST00000263856 CYTH2Q99418 400 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 SLC13A1Q9BZW2 595 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 ST6GALNAC4Q9H4F1 302 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 CYP26B1Q9NR63 512 aa13.02□□□□□ -0.33
CHMP3-201ENST00000263856 CAPN9O14815 690 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 AVILO75366 819 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 FAM155BO75949 473 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 C4BPAP04003 597 aaKnown RBP13.01□□□□□ -0.33
CHMP3-201ENST00000263856 PTPN4P29074 926 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 CCDC15Q0P6D6 951 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 BLMHQ13867 455 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 MORF4L2Q15014 288 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 CDO1Q16878 200 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 PLEKHA7Q6IQ23 1121 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 CCDC33Q8N5R6 958 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 ATP11CQ8NB49 1132 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 UCMAQ8WVF2 138 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 MIPEPQ99797 713 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 TMEM120AQ9BXJ8 343 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 RPAP3Q9H6T3 665 aaPredicted RBP13.01□□□□□ -0.33
CHMP3-201ENST00000263856 EURLQ9NYK6 297 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 CLUHO75153 1309 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 hCG_1818297A0A087WSY0 165 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 CCDC189A1A4V9 331 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 PRPF4O43172 522 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHMP3-201ENST00000263856 DGAT1O75907 488 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 INHBAP08476 426 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 ABHD2P08910 425 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 ACO1P21399 889 aaKnown RBP13.01□□□□□ -0.33
CHMP3-201ENST00000263856 RAP1GAPP47736 663 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 MYL6P60660 151 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 SNRPFP62306 86 aaKnown RBP13.01□□□□□ -0.33
CHMP3-201ENST00000263856 PTK7Q13308 1070 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 EMC2Q15006 297 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 ANO7Q6IWH7 933 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 FAM161BQ96MY7 647 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 MECRQ9BV79 373 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 MRIQ9BWK5 157 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 HAPLN2Q9GZV7 340 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
CHMP3-201ENST00000263856 LTBP1Q14766 1721 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 NVLO15381 856 aaKnown RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 ENO1P06733 434 aaKnown RBP13□□□□□ -0.33
CHMP3-201ENST00000263856 GARTP22102 1010 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 RFC5P40937 340 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 KDSRQ06136 332 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TRPC3Q13507 836 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 TAF5Q15542 800 aa13□□□□□ -0.33
CHMP3-201ENST00000263856 NPNTQ6UXI9 565 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms