RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLC7A14Q8TBB6 771 aa19.57■□□□□ 0.72
SDF4-201ENST00000263741 ACBD6Q9BR61 282 aa19.57■□□□□ 0.72
SDF4-201ENST00000263741 ABI2Q9NYB9 513 aaPredicted RBP19.57■□□□□ 0.72
SDF4-201ENST00000263741 LGALS16A8MUM7 142 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 ABLIM3O94929 683 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 CAVIN2O95810 425 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 PCSK1P29120 753 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 ACOT1Q86TX2 421 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 CASP10Q92851 521 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 KREMEN1Q96MU8 473 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 PKMYT1Q99640 499 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 CYP4F11Q9HBI6 524 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 SIX2Q9NPC8 291 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 CISHQ9NSE2 258 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 SLC27A5Q9Y2P5 690 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 C8AP07357 584 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 GPR17Q13304 367 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 MDH1BQ5I0G3 518 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 LSM14BQ9BX40 385 aaKnown RBP19.56■□□□□ 0.72
SDF4-201ENST00000263741 ELOVL4Q9GZR5 314 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 GREB1Q4ZG55 1949 aa19.56■□□□□ 0.72
SDF4-201ENST00000263741 TCF20Q9UGU0 1960 aaKnown RBP19.55■□□□□ 0.72
SDF4-201ENST00000263741 GTPBP10A4D1E9 387 aaKnown RBP19.55■□□□□ 0.72
SDF4-201ENST00000263741 PRRG1O14668 218 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 RRP9O43818 475 aaKnown RBP19.55■□□□□ 0.72
SDF4-201ENST00000263741 ATF2P15336 505 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 INCA1Q0VD86 236 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 DUSP4Q13115 394 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 RARS2Q5T160 578 aaKnown RBP19.55■□□□□ 0.72
SDF4-201ENST00000263741 ANKRD54Q6NXT1 300 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 SYCE2Q6PIF2 218 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 SPATA18Q8TC71 538 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 WHAMMQ8TF30 809 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 MYLPFQ96A32 169 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 CYP3A43Q9HB55 503 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 AFF4Q9UHB7 1163 aaKnown RBP19.55■□□□□ 0.72
SDF4-201ENST00000263741 CDH9Q9ULB4 789 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 NOTCH4Q99466 2003 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 TEX33O43247 280 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 CILPO75339 1184 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 LIN9Q5TKA1 542 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 TMC5Q6UXY8 1006 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 B3GALNT2Q8NCR0 500 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 STKLD1Q8NE28 680 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 HLA-CQ95604 372 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 UBE2TQ9NPD8 197 aaPredicted RBP19.55■□□□□ 0.72
SDF4-201ENST00000263741 FAM49BQ9NUQ9 324 aa19.55■□□□□ 0.72
SDF4-201ENST00000263741 DENND4AQ7Z401 1863 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 ZNF638Q14966 1978 aaKnown RBP19.54■□□□□ 0.72
SDF4-201ENST00000263741 CALCAP01258 141 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 TPM4P67936 248 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 CYP27A1Q02318 531 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 UBXN1Q04323 297 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 FKBP15Q5T1M5 1219 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 DPY19L2P1Q6NXN4 242 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 TMEM184AQ6ZMB5 413 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 C12orf29Q8N999 325 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 PCED1BQ96HM7 432 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 SEPT5Q99719 369 aaPredicted RBP19.54■□□□□ 0.72
SDF4-201ENST00000263741 OXCT2Q9BYC2 517 aaPredicted RBP19.54■□□□□ 0.72
SDF4-201ENST00000263741 APEX2Q9UBZ4 518 aa19.54■□□□□ 0.72
SDF4-201ENST00000263741 CLDN5O00501 218 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 SERPINC1P01008 464 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 CCDC130P13994 396 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 PTPN1P18031 435 aaKnown RBP19.53■□□□□ 0.72
SDF4-201ENST00000263741 SYCP1Q15431 976 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 ARHGAP44Q17R89 818 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 TPGS2Q68CL5 300 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 DCP1BQ8IZD4 617 aaKnown RBP19.53■□□□□ 0.72
SDF4-201ENST00000263741 UBR7Q8N806 425 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 MSLNLQ96KJ4 702 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 PATJQ8NI35 1801 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.53■□□□□ 0.72
SDF4-201ENST00000263741 EPHB6O15197 1021 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 CCL16O15467 120 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 PNMA6AP0CW24 399 aaPredicted RBP19.53■□□□□ 0.72
SDF4-201ENST00000263741 SRGAP2BP0DMP2 458 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 TBXAS1P24557 533 aaPredicted RBP19.53■□□□□ 0.72
SDF4-201ENST00000263741 ELF1P32519 619 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 GPR15P49685 360 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 FANCCQ00597 558 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 FAM171BQ6P995 826 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 UBE2Q2Q8WVN8 375 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 FAM207AQ9NSI2 230 aaPredicted RBP19.53■□□□□ 0.72
SDF4-201ENST00000263741 YIPF1Q9Y548 306 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 INSL5Q9Y5Q6 135 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 FHOD1Q9Y613 1164 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 MYO16Q9Y6X6 1858 aa19.53■□□□□ 0.72
SDF4-201ENST00000263741 LRRC10BA6NIK2 292 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 NCK2O43639 380 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 ACO1P21399 889 aaKnown RBP19.52■□□□□ 0.72
SDF4-201ENST00000263741 CYP2F1P24903 491 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 MGAT5BQ3V5L5 792 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 PPM1LQ5SGD2 360 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 MYCBPAPQ8TBZ2 947 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 PLEKHA4Q9H4M7 779 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 SFXN1Q9H9B4 322 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 DZANK1Q9NVP4 752 aa19.52■□□□□ 0.72
SDF4-201ENST00000263741 SIK3Q9Y2K2 1263 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms