RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FNTAP49354 379 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 ZNF543Q08ER8 600 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 AGAP1Q9UPQ3 857 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 LAMC2Q13753 1193 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 SLC44A4Q53GD3 710 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 DCAF6Q58WW2 860 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 OSBPL10Q9BXB5 764 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 TEX13BQ9BXU2 312 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 SMARCAL1Q9NZC9 954 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 WHRNQ9P202 907 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 CHMP2BQ9UQN3 213 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 SERPINB3P29508 390 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 ST8SIA6P61647 398 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 SLC29A2Q14542 456 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 RSPH1Q8WYR4 309 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 CARD9Q9H257 536 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 ADGRA3Q8IWK6 1321 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 CYTH3O43739 400 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 AGAP9Q5VTM2 703 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 IYDQ6PHW0 289 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 RBBP8NLQ8NC74 664 aaPredicted RBP18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 PABPC5Q96DU9 382 aaKnown RBP18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 ILKAPQ9H0C8 392 aaPredicted RBP18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 ITGA8P53708 1063 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 STX5Q13190 355 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 IER5Q5VY09 327 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 HPS3Q969F9 1004 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 TRPC7Q9HCX4 862 aa18.18■□□□□ 0.5
NOTCH3-201ENST00000263388 FLT1P17948 1338 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 CHI3L2Q15782 390 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 DDX53Q86TM3 631 aaKnown RBP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 ANKS1AQ92625 1134 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 PLA2G12BQ9BX93 195 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 GEMIN8Q9NWZ8 242 aaKnown RBP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 SLC30A1Q9Y6M5 507 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 B2RBV5 119 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 WEE2P0C1S8 567 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 TTC33Q6PID6 262 aaPredicted RBP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 ZNF512BQ96KM6 892 aaPredicted RBP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 CFAP99D6REC4 459 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 IGF2BP3O00425 579 aaKnown RBP eCLIP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 FDFT1P37268 417 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 DDI1Q8WTU0 396 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 E2F7Q96AV8 911 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 FXR2P51116 673 aaKnown RBP eCLIP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 IRAK1P51617 712 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 COG2Q14746 738 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 LRRC8DQ7L1W4 858 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 ZNF467Q7Z7K2 595 aaPredicted RBP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 CXorf56Q9H5V9 222 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 SERPIND1P05546 499 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 COMTP21964 271 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 C16orf72Q14CZ0 275 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 P3H2Q8IVL5 708 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 NEXMIFQ5QGS0 1516 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 MAP3K13O43283 966 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 MAPRE1Q15691 268 aaKnown RBP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 PCSK7Q16549 785 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 SYCP2LQ5T4T6 812 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 TPCN2Q8NHX9 752 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 ZIM3Q96PE6 472 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 IL31Q6EBC2 164 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 YAF2Q8IY57 180 aa18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
NOTCH3-201ENST00000263388 FXR1P51114 621 aaKnown RBP eCLIP18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 MTMR2Q13614 643 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 EFHC1Q5JVL4 640 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 KCNH4Q9UQ05 1017 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 SMTNL2Q2TAL5 461 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 TRIM16LQ309B1 348 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 NAPEPLDQ6IQ20 393 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 TRIM65Q6PJ69 517 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 COL23A1Q86Y22 540 aaPredicted RBP18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 FEZF2Q8TBJ5 459 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 VPS50Q96JG6 964 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 C9orf72Q96LT7 481 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 IRX2Q9BZI1 471 aaPredicted RBP18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 KLHL31Q9H511 634 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 SNX9Q9Y5X1 595 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 TC2NQ8N9U0 490 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 HES6Q96HZ4 224 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 TRIM10Q9UDY6 481 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 INPP5DQ92835 1189 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 TUBGCP4Q9UGJ1 667 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 POU4F1Q01851 419 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 RCN1Q15293 331 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 SYNE4Q8N205 404 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 SLC7A14Q8TBB6 771 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 TCN1P20061 433 aaPredicted RBP18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 GPD1P21695 349 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 MMGT1Q8N4V1 131 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 CELF1Q92879 486 aaKnown RBP18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 MAGEB18Q96M61 343 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 SH3GL1Q99961 368 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms