RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PDP2Q9P2J9 529 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 HSD17B4P51659 736 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 MTMR2Q13614 643 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 LAMC2Q13753 1193 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 PKN3Q6P5Z2 889 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 ADCK2Q7Z695 626 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 RNF148Q8N7C7 305 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 PCYOX1LQ8NBM8 494 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMG6-201ENST00000263073 MAP3K14Q99558 947 aa12.56□□□□□ -0.4
SMG6-201ENST00000263073 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.56□□□□□ -0.4
SMG6-201ENST00000263073 COL15A1P39059 1388 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 C5orf58C9J3I9 102 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 RNF103O00237 685 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 POLBP06746 335 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 IMPDH2P12268 514 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ABCE1P61221 599 aaKnown RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 FEZF2Q8TBJ5 459 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 BHMTQ93088 406 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 KDM4CQ9H3R0 1056 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ZNF556Q9HAH1 456 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 PNPLA7Q6ZV29 1317 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ABCA9Q8IUA7 1624 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 AP3B1O00203 1094 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 SPRP35270 261 aaPredicted RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 SERPINB9P50453 376 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 RASA2Q15283 850 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 WDR93Q6P2C0 686 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 SLC20A1Q8WUM9 679 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 DNAJC7Q99615 494 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 C2orf40Q9H1Z8 148 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 SEMA4AQ9H3S1 761 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 PAPOLBQ9NRJ5 636 aaKnown RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 RUVBL2Q9Y230 463 aaKnown RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 ARHGEF37A1IGU5 675 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 SAC3D1A6NKF1 404 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 NDUFS3O75489 264 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 PSMC3P17980 439 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 MAPK11Q15759 364 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 HES6Q96HZ4 224 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 SH3GL1Q99961 368 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 APOL2Q9BQE5 337 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 FAM32AQ9Y421 112 aaKnown RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 MMP19Q99542 508 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 GPRC5CQ9NQ84 441 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 TJP2Q9UDY2 1190 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 FLT1P17948 1338 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 CSDE1O75534 798 aaKnown RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 HMGCS2P54868 508 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
SMG6-201ENST00000263073 SEMA6BQ9H3T3 888 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 ARMCX1Q9P291 453 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
SMG6-201ENST00000263073 TAL1P17542 331 aaPredicted RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 EPHB2P29323 1055 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 IREB2P48200 963 aaKnown RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 IFI35P80217 286 aaPredicted RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 MAPRE1Q15691 268 aaKnown RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 ASZ1Q8WWH4 475 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 MTERF3Q96E29 417 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 CAPN10Q9HC96 672 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 PAK5Q9P286 719 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 ZNF263O14978 683 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 CTSHP09668 335 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 BAG6P46379 1132 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 RAP1GAPP47736 663 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 STAT5BP51692 787 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 RPL10AP62906 217 aaKnown RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 ORC2Q13416 577 aaPredicted RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 WLSQ5T9L3 541 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 OTOAQ7RTW8 1153 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 FLAD1Q8NFF5 587 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 TRIM54Q9BYV2 358 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 HOXC10Q9NYD6 342 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMG6-201ENST00000263073 RFC5P40937 340 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 SLC16A1P53985 500 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 RUNX1T1Q06455 604 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 PTPAQ15257 358 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 P3H2Q8IVL5 708 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 APPL2Q8NEU8 664 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 KLHL4Q9C0H6 718 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 SCN3BQ9NY72 215 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 TMA7Q9Y2S6 64 aaKnown RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 PMPCBO75439 489 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 CBX6O95503 412 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms