RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 METTL23Q86XA0 190 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 CCDC112Q8NEF3 446 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 AUTS2Q8WXX7 1259 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 PBX4Q9BYU1 374 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 FGF18O76093 207 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 MAPK8IP2Q13387 824 aaPredicted RBP29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 CERS4Q9HA82 394 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 TYMPP19971 482 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 CYP26C1Q6V0L0 522 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 PASD1Q8IV76 773 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 GLYCTKQ8IVS8 523 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 SYT11Q9BT88 431 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 ALG13Q9NP73 1137 aaKnown RBP29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 CRTAC1Q9NQ79 661 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 SEPT11Q9NVA2 429 aaKnown RBP29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 NLRC5Q86WI3 1866 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 CCDC130P13994 396 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 UNC93AQ86WB7 457 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 RNF168Q8IYW5 571 aaPredicted RBP29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 LNX1Q8TBB1 728 aaPredicted RBP29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 ZNF606Q8WXB4 792 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 PCDHB18PQ96TA0 734 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 AGPAT1Q99943 283 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 AAASQ9NRG9 546 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 ADAMTS1Q9UHI8 967 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 DSEQ9UL01 958 aa29.21■■■□□ 2.27
SMARCD3-201ENST00000262188 MYBPHLA2RUH7 354 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 ERICH4A6NGS2 130 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 DNAJB2P25686 324 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 LHX1P48742 406 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 FMO1Q01740 532 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 BMS1Q14692 1282 aaKnown RBP29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 TEX35Q5T0J7 233 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 RSPO2Q6UXX9 243 aaPredicted RBP29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 SYT15Q9BQS2 421 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 TTPALQ9BTX7 342 aa29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 ZKSCAN7Q9P0L1 754 aaPredicted RBP29.2■■■□□ 2.26
SMARCD3-201ENST00000262188 SYN3O14994 580 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 RPL17P18621 184 aaKnown RBP29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 BMPR1AP36894 532 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 GFPT1Q06210 699 aaPredicted RBP29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 MDH1BQ5I0G3 518 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 LRRTM3Q86VH5 581 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 TDHQ8IZJ6 230 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 C17orf53Q8N3J3 647 aaPredicted RBP29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 B3GALNT2Q8NCR0 500 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 RIN2Q8WYP3 895 aaPredicted RBP29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 DESI2Q9BSY9 194 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 NKX2-4Q9H2Z4 354 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 PLXNA4Q9HCM2 1894 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 GTF3C4Q9UKN8 822 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 PAEPP09466 180 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 PTPN1P18031 435 aaKnown RBP29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 PAX3P23760 479 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 CASQ1P31415 396 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 PPP1R26Q5T8A7 1209 aaPredicted RBP29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 TMTC1Q8IUR5 882 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 DEF6Q9H4E7 631 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 TMLHEQ9NVH6 421 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 PYCARDQ9ULZ3 195 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 PCDHA11Q9Y5I1 949 aa29.19■■■□□ 2.26
SMARCD3-201ENST00000262188 A0A087X0T9 212 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 CLDN5O00501 218 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 DDX3XO00571 662 aaKnown RBP eCLIP29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 FAM228BP0C875 321 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 BMP8BP34820 402 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 CDK17Q00537 523 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 ELAVL2Q12926 359 aaKnown RBP29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 ASTE1Q2TB18 679 aaPredicted RBP29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 VPS52Q8N1B4 723 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 CRYBG2Q8N1P7 616 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 TTC39CQ8N584 583 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 GOLGA6L1Q8N7Z2 621 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 CCDC42Q96M95 316 aa29.18■■■□□ 2.26
SMARCD3-201ENST00000262188 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 OAZ2O95190 189 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 SOD2P04179 222 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 CCDC172P0C7W6 258 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 KIF11P52732 1056 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 ARPP19P56211 112 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 CDR2Q01850 454 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 CYP27A1Q02318 531 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 TAP1Q03518 808 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 USP41Q3LFD5 358 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 CTXN3Q4LDR2 81 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 TOGARAM2Q6ZUX3 1019 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 RHOBTB2Q9BYZ6 727 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 TAS2R14Q9NYV8 317 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 CWC15Q9P013 229 aaKnown RBP29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 TMCO5BA8MYB1 307 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 ZNF263O14978 683 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 ADAM12O43184 909 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 ADORA2BP29275 332 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 PPM1AP35813 382 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 BPIFB4P59827 614 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 MLLT1Q03111 559 aaPredicted RBP29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 MRPL58Q14197 206 aaKnown RBP29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 DDX53Q86TM3 631 aaKnown RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms