RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TCF4P15884 667 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 LMNB2Q03252 620 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 PDK3Q15120 406 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 SNRNP35Q16560 246 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 Q4G0T1 1027 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 TMEM63BQ5T3F8 832 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 CYP4A22Q5TCH4 519 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 PLA2G4FQ68DD2 849 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 ACAD10Q6JQN1 1059 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 LRRC8BQ6P9F7 803 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 DARS2Q6PI48 645 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 DEFB107AQ8IZN7 70 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 PPWD1Q96BP3 646 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 GGA1Q9UJY5 639 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 APOBEC2Q9Y235 224 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 NUMBLQ9Y6R0 609 aa16.67■□□□□ 0.26
PRPF40B-201ENST00000261897 EDIL3O43854 480 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 WEE2P0C1S8 567 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 CDK7P50613 346 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 C16orf72Q14CZ0 275 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 KRT39Q6A163 491 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 C16orf46Q6P387 395 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 DNAJC24Q6P3W2 148 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 TMPRSS6Q8IU80 811 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 NDUFAF2Q8N183 169 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 SEMA4DQ92854 862 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 E2F7Q96AV8 911 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 CD209Q9NNX6 404 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 SLC7A8Q9UHI5 535 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 DTNAQ9Y4J8 743 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 ANKRD33BA6NCL7 494 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 CYLC2Q14093 348 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 ENDOVQ8N8Q3 282 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 FBXL13Q8NEE6 735 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 MMP19Q99542 508 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 WWP1Q9H0M0 922 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 CAAP1Q9H8G2 361 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 PAIP2BQ9ULR5 123 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 GTPBP10A4D1E9 387 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 CST8O60676 142 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 TMCC1O94876 653 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 GLRA2P23416 452 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 ACOT2P49753 483 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 MYBPC3Q14896 1274 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 KBTBD12Q3ZCT8 623 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 LENG1Q96BZ8 264 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 FAF2Q96CS3 445 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 HSPBAP1Q96EW2 488 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 TXNDC16Q9P2K2 825 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
PRPF40B-201ENST00000261897 hCG_1984214I3L0E3 225 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 RPL7AP62424 266 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 BST1Q10588 318 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 HSP90AA5PQ58FG0 334 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 KRT80Q6KB66 452 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 ZNF713Q8N859 430 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 TIPINQ9BVW5 301 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 IVNS1ABPQ9Y6Y0 642 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 GOLGA8QA0A0J9YX86 632 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 GOLGA8OA6NCC3 632 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 GOLGA8NF8WBI6 632 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 DNALI1O14645 258 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 LYPLA1O75608 230 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 TOP3BO95985 862 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 CYP1A1P04798 512 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 ITGA2BP08514 1039 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 FUT4P22083 530 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 MAGEA10P43363 369 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 PDE1BQ01064 536 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 ANKRD22Q5VYY1 191 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 GRAMD4Q6IC98 578 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 C1orf228Q6PIY5 440 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 ZCCHC9Q8N567 271 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 USP13Q92995 863 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 MAN1C1Q9NR34 630 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 SMYD2Q9NRG4 433 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 F5H6K3 240 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 F8VP50 259 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 ABLIM1O14639 778 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 CIITAP33076 1130 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 EFHC1Q5JVL4 640 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 TREML1Q86YW5 311 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 WDR75Q8IWA0 830 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 ZFAND2BQ8WV99 257 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 PANX3Q96QZ0 392 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 GPR88Q9GZN0 384 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 DUOX1Q9NRD9 1551 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 UMODL1Q5DID0 1318 aa16.65■□□□□ 0.26
PRPF40B-201ENST00000261897 SLITRK3O94933 977 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ELK3P41970 407 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 RPL10AP62906 217 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 PPIDQ08752 370 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 TRMT5Q32P41 509 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 SFT2D3Q587I9 215 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 ANO5Q75V66 913 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 HPS6Q86YV9 775 aa16.64■□□□□ 0.25
PRPF40B-201ENST00000261897 EBF4Q9BQW3 602 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms