RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 EBF3Q9H4W6 596 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 PCDH9Q9HC56 1237 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 ARMCX1Q9P291 453 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 TAGLN3Q9UI15 199 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 CLUHO75153 1309 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 BUD23O43709 281 aaKnown RBP12.07□□□□□ -0.48
TROAP-201ENST00000257909 TMCC1O94876 653 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 MT-ND3P03897 115 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 ASLP04424 464 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 HLA-DOAP06340 250 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 ENO1P06733 434 aaKnown RBP12.07□□□□□ -0.48
TROAP-201ENST00000257909 VAV1P15498 845 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 GLRA2P23416 452 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 RGS2P41220 211 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 CPA2P48052 419 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 C3orf62Q6ZUJ4 267 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 ANKMY2Q8IV38 441 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 FBXL13Q8NEE6 735 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 ZNF526Q8TF50 670 aaPredicted RBP12.07□□□□□ -0.48
TROAP-201ENST00000257909 MTBPQ96DY7 904 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 APOPT1Q96IL0 206 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 WDR18Q9BV38 432 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 ALG13Q9NP73 1137 aaKnown RBP12.07□□□□□ -0.48
TROAP-201ENST00000257909 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 SLC7A8Q9UHI5 535 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 STRIP2Q9ULQ0 834 aa12.07□□□□□ -0.48
TROAP-201ENST00000257909 IQANK1A0A1B0GTG1 560 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 DENND3A2RUS2 1198 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 GOLGA8RI6L899 631 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ZSCAN9O15535 394 aaPredicted RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 COQ9O75208 318 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 FAM200BP0CF97 657 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 UQCRBP14927 111 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ETS2P15036 469 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 HOXA13P31271 388 aaPredicted RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 DCAKDQ8WVC6 231 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 CPA5Q8WXQ8 436 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 LENG1Q96BZ8 264 aaPredicted RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 THTPAQ9BU02 230 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 C17orf75Q9HAS0 396 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 DDX4Q9NQI0 724 aaKnown RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 WRAP73Q9P2S5 460 aaPredicted RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 SSX2IPQ9Y2D8 614 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 MYPNQ86TC9 1320 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ITGAVP06756 1048 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ADRB2P07550 413 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 CCDC166P0CW27 439 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ETS1P14921 441 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 TSHRP16473 764 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 BGNP21810 368 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ATP2B4P23634 1241 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 SSTR1P30872 391 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 VCPP55072 806 aaKnown RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 BPIFB4P59827 614 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 GCNT1Q02742 428 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 CDK18Q07002 472 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 EFTUD2Q15029 972 aaKnown RBP eCLIP12.06□□□□□ -0.483e-10■■■■■ 31.5
TROAP-201ENST00000257909 TMEM259Q4ZIN3 620 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 MON1BQ7L1V2 547 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 NLRX1Q86UT6 975 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ALYREFQ86V81 257 aaKnown RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 TRIM42Q8IWZ5 723 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 FAM172AQ8WUF8 416 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 DHX38Q92620 1227 aaKnown RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 TTC17Q96AE7 1141 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 PLEKHG4BQ96PX9 1271 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 CYTH2Q99418 400 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 LXNQ9BS40 222 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 WWP1Q9H0M0 922 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 C12orf65Q9H3J6 166 aaKnown RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 PTTG2Q9NZH5 202 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 PPM1HQ9ULR3 514 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 G3BP2Q9UN86 482 aaKnown RBP12.06□□□□□ -0.48
TROAP-201ENST00000257909 PCDHB2Q9Y5E7 798 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 ZHX2Q9Y6X8 837 aa12.06□□□□□ -0.48
TROAP-201ENST00000257909 FAM237BA0A1B0GVD1 139 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 I3L4J1 428 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 UFL1O94874 794 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 GJC1P36383 396 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 MTA1Q13330 715 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 OASLQ15646 514 aaKnown RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 SNRNP35Q16560 246 aaKnown RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 KAZNQ674X7 775 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 DHDDSQ86SQ9 333 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 USP37Q86T82 979 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 NKD2Q969F2 451 aaPredicted RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 DGCR14Q96DF8 476 aaKnown RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 VCPIP1Q96JH7 1222 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 FAM111AQ96PZ2 611 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 KLF6Q99612 283 aaPredicted RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 S100A14Q9HCY8 104 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 CNTN3Q9P232 1028 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 USTQ9Y2C2 406 aa12.05□□□□□ -0.48
TROAP-201ENST00000257909 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
TROAP-201ENST00000257909 SCINQ9Y6U3 715 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms