RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GIMAP4Q9NUV9 329 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 SLC4A1P02730 911 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 PDGFRBP09619 1106 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 DR1Q01658 176 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 SLC9A7Q96T83 725 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 MORF4L1Q9UBU8 362 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 RSPH14Q9UHP6 348 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 FTLP02792 175 aaPredicted RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 CES1P23141 567 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 TMEM175Q9BSA9 504 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 COMMD8Q9NX08 183 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 A0A1W2PQ67 120 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 C2orf81A6NN90 581 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 GOLGA8TH3BQL2 631 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 M0QYT0 321 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SYN3O14994 580 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 BAIAP3O94812 1187 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 COL2A1P02458 1487 aaPredicted RBP14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ENPEPQ07075 957 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 RCN2Q14257 317 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SPOPLQ6IQ16 392 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 PHC3Q8NDX5 983 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SPPL2BQ8TCT7 592 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 CHMP6Q96FZ7 201 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 TBCBQ99426 244 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ARHGAP39Q9C0H5 1083 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SHPRHQ149N8 1683 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 TTC4O95801 387 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 HIST2H2ACQ16777 129 aaPredicted RBP14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 HIST2H2AA3Q6FI13 130 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 DDI1Q8WTU0 396 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 DDX43Q9NXZ2 648 aaKnown RBP14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ARVCFO00192 962 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 DNM1LO00429 736 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ZBTB22O15209 634 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 FGRP09769 529 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 DDX6P26196 483 aaKnown RBP eCLIP14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 AKT1P31749 480 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 CCR1P32246 355 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 CYP24A1Q07973 514 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ACAP1Q15027 740 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 CEP68Q76N32 757 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SNCAIPQ9Y6H5 919 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ESRRBO95718 433 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 IGSF6O95976 241 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 EPHB4P54760 987 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 GRAMD1CQ8IYS0 662 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 GIPC2Q8TF65 315 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SUSD6Q92537 303 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SNX19Q92543 992 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ZNF668Q96K58 619 aaPredicted RBP14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 SYNDIG1Q9H7V2 258 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 EML4Q9HC35 981 aaKnown RBP14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 PAK5Q9P286 719 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 CDC23Q9UJX2 597 aa14.05□□□□□ -0.16
PRPF38A-201ENST00000257181 ZSCAN5CA6NGD5 496 aaPredicted RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 PTPN3P26045 913 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 GRM5P41594 1212 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 ETF1P62495 437 aaKnown RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 GKAP1Q5VSY0 366 aaPredicted RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 MFN1Q8IWA4 741 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 SMYD4Q8IYR2 804 aaPredicted RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 TMEM176AQ96HP8 235 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 RILPQ96NA2 401 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 TRIM15Q9C019 465 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 IGFLR1Q9H665 355 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 KRT82Q9NSB4 513 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 SQORQ9Y6N5 450 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 POLR2EP19388 210 aaKnown RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 PSMD6Q15008 389 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CYB5D1Q6P9G0 228 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 LRRC8AQ8IWT6 810 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CASP10Q92851 521 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 POP1Q99575 1024 aaKnown RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CNOT10Q9H9A5 744 aaKnown RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 ABCC13Q9NSE7 274 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CALCOCO1Q9P1Z2 691 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 INSL6Q9Y581 213 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 YDJCA8MPS7 323 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 EBAG9O00559 213 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 SRGAP2O75044 1071 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 GCKP35557 465 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CCT5P48643 541 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CRHR2Q13324 411 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 OTOP1Q7RTM1 612 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 TOP6BLQ8N6T0 577 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 RPRD1AQ96P16 312 aaPredicted RBP14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 SUN2Q9UH99 717 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 PRMT3O60678 531 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 NFATC1O95644 943 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 SERPINB9P50453 376 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 CBX1P83916 185 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 BEX3Q00994 111 aa14.04□□□□□ -0.16
PRPF38A-201ENST00000257181 ADCY1Q08828 1119 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms