RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 COG7P83436 770 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 MGAT5Q09328 741 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 TRIM29Q14134 588 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 C15orf59Q2T9L4 293 aaPredicted RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 USP41Q3LFD5 358 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 ACSBG2Q5FVE4 666 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 AAGABQ6PD74 315 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 LVRNQ6Q4G3 990 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 IZUMO2Q6UXV1 221 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 KBTBD2Q8IY47 623 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 IGDCC4Q8TDY8 1250 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 CHURC1Q8WUH1 139 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 DNAJC1Q96KC8 554 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 NUF2Q9BZD4 464 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 PORCNQ9H237 461 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 C10orf88Q9H8K7 445 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 ZNF304Q9HCX3 659 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 GOLGA8MH3BSY2 632 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 TNPO2O14787 897 aaKnown RBP12.41□□□□□ -0.42
CCNA1-201ENST00000255465 ZNF263O14978 683 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 PLA2G6O60733 806 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 RNASEH1O60930 286 aaKnown RBP12.41□□□□□ -0.42
CCNA1-201ENST00000255465 KRT36O76013 467 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 OCM2P0CE71 109 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
CCNA1-201ENST00000255465 T-ENOLP0DO92 83 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 CHRNB1P11230 501 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 RARGP13631 454 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 PHKA2P46019 1235 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 EIF2B2P49770 351 aaKnown RBP12.41□□□□□ -0.42
CCNA1-201ENST00000255465 KIF11P52732 1056 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 CREB5Q02930 508 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 STRN3Q13033 797 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 TMEM67Q5HYA8 995 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 KIAA1841Q6NSI8 718 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 ARHGEF18Q6ZSZ5 1173 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 FAM160B2Q86V87 743 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 ANGPTL6Q8NI99 470 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 CALML6Q8TD86 181 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 CHPT1Q8WUD6 406 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 SDCCAG3Q96C92 435 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 ERGIC2Q96RQ1 377 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 BTBD10Q9BSF8 475 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 SPATC1LQ9H0A9 340 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 AZI2Q9H6S1 392 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 NCOA5Q9HCD5 579 aaKnown RBP12.41□□□□□ -0.42
CCNA1-201ENST00000255465 PARP2Q9UGN5 583 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 PCSK1NQ9UHG2 260 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 GGT7Q9UJ14 662 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 CTNND2Q9UQB3 1225 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 ERVK-11Q9UQG0 969 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 PTPN22Q9Y2R2 807 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 IFT52Q9Y366 437 aa12.41□□□□□ -0.42
CCNA1-201ENST00000255465 BAZ2BQ9UIF8 2168 aaKnown RBP12.41□□□□□ -0.42
CCNA1-201ENST00000255465 FRMPD2Q68DX3 1309 aaPredicted RBP12.41□□□□□ -0.42
CCNA1-201ENST00000255465 FAM187AA6NFU0 413 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 SLC26A4O43511 780 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CSDE1O75534 798 aaKnown RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 GAS8O95995 478 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CLPTM1O96005 669 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 KRT2P35908 639 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 GRIA2P42262 883 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CCR3P51677 355 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 STX17P56962 302 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CCNA1P78396 465 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 IKQ13123 557 aaPredicted RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 WTAPQ15007 396 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CYTH1Q15438 398 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 PHKG1Q16816 387 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 C6orf163Q5TEZ5 329 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 FBXO46Q6PJ61 603 aaPredicted RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 PDSS2Q86YH6 399 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 LURAP1LQ8IV03 231 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 SUN5Q8TC36 379 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 MS4A14Q96JA4 679 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CEP44Q9C0F1 390 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 ARMC1Q9NVT9 282 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 NDE1Q9NXR1 346 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 SMARCAL1Q9NZC9 954 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 SRRDQ9UH36 339 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 ACTL7BQ9Y614 415 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 SLC22A1O15245 554 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 MAGEC1O60732 1142 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 DKC1O60832 514 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 FKBP9O95302 570 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 PRKACBP22694 351 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms