RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TMEM209Q96SK2 561 aa15.03■□□□□ -0
VPS25-201ENST00000253794 TRIM5Q9C035 493 aa15.03■□□□□ -0
VPS25-201ENST00000253794 DPEP3Q9H4B8 488 aa15.03■□□□□ -0
VPS25-201ENST00000253794 ABCB6Q9NP58 842 aa15.03■□□□□ -0
VPS25-201ENST00000253794 AFF4Q9UHB7 1163 aaKnown RBP15.03■□□□□ -0
VPS25-201ENST00000253794 MYBPHLA2RUH7 354 aa15.02■□□□□ -0
VPS25-201ENST00000253794 MTMR11A4FU01 709 aa15.02■□□□□ -0
VPS25-201ENST00000253794 FOXN3O00409 490 aaPredicted RBP15.02■□□□□ -0
VPS25-201ENST00000253794 PDGFRBP09619 1106 aa15.02■□□□□ -0
VPS25-201ENST00000253794 CPB1P15086 417 aa15.02■□□□□ -0
VPS25-201ENST00000253794 TRIM21P19474 475 aaKnown RBP15.02■□□□□ -0
VPS25-201ENST00000253794 ACAT1P24752 427 aaKnown RBP15.02■□□□□ -0
VPS25-201ENST00000253794 DRAP1Q14919 205 aaPredicted RBP15.02■□□□□ -0
VPS25-201ENST00000253794 MEA1Q16626 185 aa15.02■□□□□ -0
VPS25-201ENST00000253794 ARHGAP17Q68EM7 881 aa15.02■□□□□ -0
VPS25-201ENST00000253794 TMEM270Q6UE05 265 aa15.02■□□□□ -0
VPS25-201ENST00000253794 FMNL3Q8IVF7 1028 aa15.02■□□□□ -0
VPS25-201ENST00000253794 TCEAL8Q8IYN2 117 aa15.02■□□□□ -0
VPS25-201ENST00000253794 RBBP8NLQ8NC74 664 aaPredicted RBP15.02■□□□□ -0
VPS25-201ENST00000253794 SPPL2BQ8TCT7 592 aa15.02■□□□□ -0
VPS25-201ENST00000253794 BAP1Q92560 729 aa15.02■□□□□ -0
VPS25-201ENST00000253794 PCMTD1Q96MG8 357 aaPredicted RBP15.02■□□□□ -0
VPS25-201ENST00000253794 FAM161BQ96MY7 647 aa15.02■□□□□ -0
VPS25-201ENST00000253794 TLE6Q9H808 572 aa15.02■□□□□ -0
VPS25-201ENST00000253794 FBXW11Q9UKB1 542 aa15.02■□□□□ -0
VPS25-201ENST00000253794 PCDHB4Q9Y5E5 795 aa15.02■□□□□ -0
VPS25-201ENST00000253794 MYO7AQ13402 2215 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 MYO9BQ13459 2157 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 RNF225M0QZC1 329 aaPredicted RBP15.01□□□□□ -0.01
VPS25-201ENST00000253794 TGM5O43548 720 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 NCK2O43639 380 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 ATP2C2O75185 946 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 GLUD1P00367 558 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 OR4Q2P0C623 313 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 KLRC2P26717 231 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 CDC25BP30305 580 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 MAGEA11P43364 429 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 NRIP1P48552 1158 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 PSMC1P62191 440 aaKnown RBP15.01□□□□□ -0.01
VPS25-201ENST00000253794 HYAL1Q12794 435 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 TRIM14Q14142 442 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 ARID5BQ14865 1188 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 PTPN21Q16825 1174 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 ARHGAP44Q17R89 818 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 SLC39A12Q504Y0 691 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 TCEAL5Q5H9L2 206 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 RNF19BQ6ZMZ0 732 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 C4orf50Q6ZRC1 276 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 ACOT1Q86TX2 421 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 EFHBQ8N7U6 833 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 PCED1BQ96HM7 432 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 PLEKHA4Q9H4M7 779 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 TMLHEQ9NVH6 421 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 DPP7Q9UHL4 492 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 GTF3C4Q9UKN8 822 aa15.01□□□□□ -0.01
VPS25-201ENST00000253794 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.01□□□□□ -0.01
VPS25-201ENST00000253794 PRRC2BQ5JSZ5 2229 aaKnown RBP15.01□□□□□ -0.01
VPS25-201ENST00000253794 GOLGA6L3A6NEY3 463 aa15□□□□□ -0.01
VPS25-201ENST00000253794 GYPCP04921 128 aa15□□□□□ -0.01
VPS25-201ENST00000253794 POU2F2P09086 479 aa15□□□□□ -0.01
VPS25-201ENST00000253794 VDRP11473 427 aa15□□□□□ -0.01
VPS25-201ENST00000253794 CA8P35219 290 aa15□□□□□ -0.01
VPS25-201ENST00000253794 SOX5P35711 763 aa15□□□□□ -0.01
VPS25-201ENST00000253794 TBX2Q13207 712 aaPredicted RBP15□□□□□ -0.01
VPS25-201ENST00000253794 RAPGEF1Q13905 1077 aa15□□□□□ -0.01
VPS25-201ENST00000253794 STILQ15468 1287 aa15□□□□□ -0.01
VPS25-201ENST00000253794 CCDC142Q17RM4 750 aa15□□□□□ -0.01
VPS25-201ENST00000253794 CTC1Q2NKJ3 1217 aa15□□□□□ -0.01
VPS25-201ENST00000253794 MDH1BQ5I0G3 518 aa15□□□□□ -0.01
VPS25-201ENST00000253794 PAQR9Q6ZVX9 377 aa15□□□□□ -0.01
VPS25-201ENST00000253794 FUKQ8N0W3 1084 aa15□□□□□ -0.01
VPS25-201ENST00000253794 MYLIPQ8WY64 445 aa15□□□□□ -0.01
VPS25-201ENST00000253794 MYLPFQ96A32 169 aa15□□□□□ -0.01
VPS25-201ENST00000253794 HNRNPABQ99729 332 aaKnown RBP15□□□□□ -0.01
VPS25-201ENST00000253794 GRPEL1Q9HAV7 217 aa15□□□□□ -0.01
VPS25-201ENST00000253794 NLRC4Q9NPP4 1024 aa15□□□□□ -0.01
VPS25-201ENST00000253794 CAPN11Q9UMQ6 739 aa15□□□□□ -0.01
VPS25-201ENST00000253794 PCDHB5Q9Y5E4 795 aa15□□□□□ -0.01
VPS25-201ENST00000253794 HCFC2Q9Y5Z7 792 aa15□□□□□ -0.01
VPS25-201ENST00000253794 O00370 1275 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 CSPG5O95196 566 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 KRT5P13647 590 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 HOXA9P31269 272 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 CLCN1P35523 988 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 STAT1P42224 750 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 BPIFB4P59827 614 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 PLCB2Q00722 1185 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 ORC1Q13415 861 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 ADAM15Q13444 863 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 ZNF394Q53GI3 561 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 SGO2Q562F6 1265 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 VSTM1Q6UX27 236 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 CACNA2D4Q7Z3S7 1137 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 C12orf29Q8N999 325 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 KREMEN2Q8NCW0 462 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 VN1R2Q8NFZ6 395 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 SYN2Q92777 582 aaPredicted RBP14.99□□□□□ -0.01
VPS25-201ENST00000253794 CASP10Q92851 521 aa14.99□□□□□ -0.01
VPS25-201ENST00000253794 CEP295NLQ96MC4 621 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms