RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 SIPA1Q96FS4 1042 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 AFF4Q9UHB7 1163 aaKnown RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 ERVK-11Q9UQG0 969 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 A0A0G2JND7 137 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 KANSL1LA0AUZ9 987 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 SRRM3A6NNA2 597 aaPredicted RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 IFNA14P01570 189 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 EEF1B2P24534 225 aaKnown RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 MAPK6Q16659 721 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 ERMARDQ5T6L9 678 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 FAM122CQ6P4D5 195 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 SRBD1Q8N5C6 995 aaKnown RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 PPP1R14CQ8TAE6 165 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 CAVIN3Q969G5 261 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 MLXIPQ9HAP2 919 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 PSMA7O14818 248 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 RASGRF2O14827 1237 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 WFS1O76024 890 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 FAM228BP0C875 321 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 MCF2P10911 925 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 GYS1P13807 737 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 ZNF3P17036 446 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 PTPREP23469 700 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 PLTPP55058 493 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 SCRN3Q0VDG4 424 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 STX3Q13277 289 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 SPIDRQ14159 915 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 DALRD3Q5D0E6 543 aaKnown RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 AGBL2Q5U5Z8 902 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 CDR2LQ86X02 465 aaPredicted RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 CLEC10AQ8IUN9 316 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 MMAAQ8IVH4 418 aaKnown RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 MMGT1Q8N4V1 131 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 PPP4R1Q8TF05 950 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 ECSITQ9BQ95 431 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 CHID1Q9BWS9 393 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 DBR1Q9UK59 544 aaKnown RBP13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 CFL2Q9Y281 166 aa13.95□□□□□ -0.18
COLGALT1-201ENST00000252599 FTCDO95954 541 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 MAP4P27816 1152 aaKnown RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 ZNF844Q08AG5 666 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 CCDC89Q8N998 374 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 ITPKCQ96DU7 683 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 NTN4Q9HB63 628 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 SNX12Q9UMY4 172 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 MAP3K6O95382 1288 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 SLC4A1P02730 911 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 PABPC4LP0CB38 370 aaKnown RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 ACADSBP45954 432 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 TOB1P50616 345 aaPredicted RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 KCNJ12Q14500 433 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 PDK3Q15120 406 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 EARS2Q5JPH6 523 aaKnown RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 HAUS3Q68CZ6 603 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 KBTBD2Q8IY47 623 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 PBKQ96KB5 322 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 GCNAQ96QF7 691 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 KIAA1683Q9H0B3 1180 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 RPRD1BQ9NQG5 326 aaKnown RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 HEMK1Q9Y5R4 338 aaPredicted RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 WASF2Q9Y6W5 498 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 SSX5O60225 188 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 USP1O94782 785 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 COL6A1P12109 1028 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 STAT3P40763 770 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 TECP42680 631 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 OCRLQ01968 901 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 PLEKHM3Q6ZWE6 761 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 CCDC103Q8IW40 242 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 PDCD6IPQ8WUM4 868 aaKnown RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 FANCEQ9HB96 536 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 SPATA2Q9UM82 520 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 SCAF8Q9UPN6 1271 aaKnown RBP13.94□□□□□ -0.18
COLGALT1-201ENST00000252599 PRKCBP05771 671 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 ARHGDIAP52565 204 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 CHN2P52757 468 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 AP1B1Q10567 949 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 NFE2L1Q14494 772 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 GEN1Q17RS7 908 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 NADK2Q4G0N4 442 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 CCNYL1Q8N7R7 359 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 CATSPER1Q8NEC5 780 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 POMGNT1Q8WZA1 660 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 SNF8Q96H20 258 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 RHOBTB2Q9BYZ6 727 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 POLMQ9NP87 494 aaPredicted RBP13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 CRNNQ9UBG3 495 aaPredicted RBP13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 DUSP10Q9Y6W6 482 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 ZNF804BA4D1E1 1349 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 POC1B-GALNT4F8VUJ3 575 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 HDAC3O15379 428 aa13.93□□□□□ -0.18
COLGALT1-201ENST00000252599 DLGAP3O95886 979 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms