RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 USP27XA6NNY8 438 aa12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 AKT1P31749 480 aa12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CLCN6P51797 869 aa12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 AMPD2Q01433 879 aa12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 EFEMP1Q12805 493 aa12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 OLA1Q9NTK5 396 aaKnown RBP12.76□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SLC12A8A0AV02 714 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ZNF197O14709 1029 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PHF2O75151 1096 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ZWINTO95229 277 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 MMEP08473 750 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 UGP2Q16851 508 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TSNAXIP1Q2TAA8 658 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 GJC2Q5T442 439 aaPredicted RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TBC1D1Q86TI0 1168 aaPredicted RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TRAIPQ9BWF2 469 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 FTHL17Q9BXU8 183 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CELF4Q9BZC1 486 aaKnown RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SUN2Q9UH99 717 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SLC4A7Q9Y6M7 1214 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CFAP99D6REC4 459 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PCK1P35558 622 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PTGER2P43116 358 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CCNYL1Q8N7R7 359 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 LRGUKQ96M69 825 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 WDR24Q96S15 920 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ZBTB18Q99592 522 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 FBXO44Q9H4M3 255 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 A0A087X0T9 212 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 LACTBL1A8MY62 500 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 FZD9O00144 591 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TTC4O95801 387 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 FAM228BP0C875 321 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 MYL4P12829 197 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 KPNA1P52294 538 aaPredicted RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 GTF2A1P52655 376 aaPredicted RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 C1orf186Q6ZWK4 172 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 HAS1Q92839 578 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 THAP2Q9H0W7 228 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 AFF4Q9UHB7 1163 aaKnown RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 G3BP2Q9UN86 482 aaKnown RBP12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 USP20Q9Y2K6 914 aa12.75□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CTIFO43310 598 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 MAFO75444 373 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SLC12A3P55017 1021 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CCL23P55773 120 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 POLD3Q15054 466 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TTC31Q49AM3 519 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ZBTB45Q96K62 511 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 INPP4AQ96PE3 977 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ATP9AO75110 1047 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ELNP15502 786 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ETFBP38117 255 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TKTL1P51854 596 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SMAD1Q15797 465 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PCSK7Q16549 785 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 KCNK18Q7Z418 384 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SDCCAG3Q96C92 435 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CDK5RAP1Q96SZ6 601 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CYTH2Q99418 400 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CNPY3Q9BT09 278 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CHORDC1Q9UHD1 332 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 RALBP11234 206 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TUFMP49411 452 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 NDST1P52848 882 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PLD1Q13393 1074 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ZSCAN26Q16670 478 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PHLDB3Q6NSJ2 640 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 C4orf22Q6V702 233 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 LOC102724159A0A0B4J2E5 919 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 F8VZ95 297 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 XYLBO75191 536 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 NDUFS3O75489 264 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 GLRA2P23416 452 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CCZ1BP86790 482 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CCZ1P86791 482 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 PWP2Q15269 919 aaKnown RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 E4F1Q66K89 784 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 IPMKQ8NFU5 416 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 USP13Q92995 863 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 GPR63Q9BZJ6 419 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 BAIAP2L1Q9UHR4 511 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
ZKSCAN3-201ENST00000252211 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
ZKSCAN3-201ENST00000252211 ACAT1P24752 427 aaKnown RBP12.73□□□□□ -0.37
ZKSCAN3-201ENST00000252211 NCAPHQ15003 741 aa12.73□□□□□ -0.37
ZKSCAN3-201ENST00000252211 E2F5Q15329 346 aa12.73□□□□□ -0.37
ZKSCAN3-201ENST00000252211 DDI1Q8WTU0 396 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms