RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SEZ6Q53EL9 994 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 RHPN2Q8IUC4 686 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 ATL2Q8NHH9 583 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 FBF1Q8TES7 1133 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 DHX38Q92620 1227 aaKnown RBP17.92■□□□□ 0.46
FOXA1-201ENST00000250448 TARS2Q9BW92 718 aaKnown RBP17.92■□□□□ 0.46
FOXA1-201ENST00000250448 TOPORSQ9NS56 1045 aaPredicted RBP17.92■□□□□ 0.46
FOXA1-201ENST00000250448 TTC36A6NLP5 189 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 K7ERI5 159 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 DYNC1LI2O43237 492 aaPredicted RBP17.91■□□□□ 0.46
FOXA1-201ENST00000250448 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
FOXA1-201ENST00000250448 INSRRP14616 1297 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 FOXN2P32314 431 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 GPC3P51654 580 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 ADCY1Q08828 1119 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 SNRNP35Q16560 246 aaKnown RBP17.91■□□□□ 0.46
FOXA1-201ENST00000250448 BZW1Q7L1Q6 419 aaKnown RBP17.91■□□□□ 0.46
FOXA1-201ENST00000250448 OR6J1Q8NGC5 347 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 TRIM6Q9C030 488 aaPredicted RBP17.91■□□□□ 0.46
FOXA1-201ENST00000250448 ZFYVE28Q9HCC9 887 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 ANKFY1Q9P2R3 1169 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 ZSWIM8A7E2V4 1837 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 RBM47A0AV96 593 aaKnown RBP17.91■□□□□ 0.46
FOXA1-201ENST00000250448 TNPO2O14787 897 aaKnown RBP17.91■□□□□ 0.46
FOXA1-201ENST00000250448 WFS1O76024 890 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 LIG4P49917 911 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 CENPCQ03188 943 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 STAT4Q14765 748 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 RNF149Q8NC42 400 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 NLRP4Q96MN2 994 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 CCDC77Q9BR77 488 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 FAM213AQ9BRX8 229 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 HAPLN2Q9GZV7 340 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 TMEM8AQ9HCN3 771 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 EURLQ9NYK6 297 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 ERAP1Q9NZ08 941 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 COQ4Q9Y3A0 265 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 MROH7Q68CQ1 1323 aa17.91■□□□□ 0.46
FOXA1-201ENST00000250448 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 UNC5CO95185 931 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 RRM1P23921 792 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 NAMPTP43490 491 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 LAMTOR4Q0VGL1 99 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 TMED2Q15363 201 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 DUSP28Q4G0W2 176 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 BBOF1Q8ND07 529 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 PPTC7Q8NI37 304 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 DDX27Q96GQ7 796 aaKnown RBP17.9■□□□□ 0.46
FOXA1-201ENST00000250448 TXLNGQ9NUQ3 528 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 SLC5A4Q9NY91 659 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 NEU2Q9Y3R4 380 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 IL9RQ01113 521 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 TNFAIP2Q03169 654 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 ZBTB41Q5SVQ8 909 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 IZUMO3Q5VZ72 239 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 OLFML2BQ68BL8 750 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 EFCAB12Q6NXP0 572 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 FAM47EQ6ZV65 393 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 SMC1BQ8NDV3 1235 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 SLC17A8Q8NDX2 589 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 TAS1R2Q8TE23 839 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 C9orf72Q96LT7 481 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 RAB3IPQ96QF0 476 aaPredicted RBP17.9■□□□□ 0.46
FOXA1-201ENST00000250448 C16orf70Q9BSU1 422 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 PITPNM3Q9BZ71 974 aa17.9■□□□□ 0.46
FOXA1-201ENST00000250448 AVENQ9NQS1 362 aaPredicted RBP17.9■□□□□ 0.46
FOXA1-201ENST00000250448 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
FOXA1-201ENST00000250448 ATP2A2P16615 1042 aaKnown RBP17.89■□□□□ 0.46
FOXA1-201ENST00000250448 SLC1A1P43005 524 aa17.89■□□□□ 0.46
FOXA1-201ENST00000250448 ACOT2P49753 483 aa17.89■□□□□ 0.46
FOXA1-201ENST00000250448 MCCD1P59942 119 aaPredicted RBP17.89■□□□□ 0.46
FOXA1-201ENST00000250448 LMBRD2Q68DH5 695 aaPredicted RBP17.89■□□□□ 0.46
FOXA1-201ENST00000250448 ZNF365Q70YC5 407 aa17.89■□□□□ 0.46
FOXA1-201ENST00000250448 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.46
FOXA1-201ENST00000250448 ETNK1Q9HBU6 452 aa17.89■□□□□ 0.46
FOXA1-201ENST00000250448 FAM47DPA6NHR8 397 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 CALCAP01258 141 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 KRT5P13647 590 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 RELL1Q8IUW5 271 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 MCOLN2Q8IZK6 566 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 RIBC1Q8N443 379 aaPredicted RBP17.89■□□□□ 0.45
FOXA1-201ENST00000250448 FBXL13Q8NEE6 735 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 PARD3BQ8TEW8 1205 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 RASA4BC9J798 803 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 H3BRB1 525 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 RASA4O43374 803 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 HBP1O60381 514 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 NEBLO76041 1014 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 WNT7BP56706 349 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 WDR4P57081 412 aaKnown RBP17.89■□□□□ 0.45
FOXA1-201ENST00000250448 CCDC89Q8N998 374 aa17.89■□□□□ 0.45
FOXA1-201ENST00000250448 TUT1Q9H6E5 874 aaKnown RBP17.89■□□□□ 0.45
FOXA1-201ENST00000250448 MMP3P08254 477 aa17.88■□□□□ 0.45
FOXA1-201ENST00000250448 ABHD2P08910 425 aa17.88■□□□□ 0.45
FOXA1-201ENST00000250448 RALAP11233 206 aa17.88■□□□□ 0.45
FOXA1-201ENST00000250448 SREBF2Q12772 1141 aa17.88■□□□□ 0.45
FOXA1-201ENST00000250448 KLF1Q13351 362 aaPredicted RBP17.88■□□□□ 0.45
FOXA1-201ENST00000250448 BRDTQ58F21 947 aaPredicted RBP17.88■□□□□ 0.45
FOXA1-201ENST00000250448 PRUNE1Q86TP1 453 aa17.88■□□□□ 0.45
FOXA1-201ENST00000250448 FAM81BQ96LP2 452 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms