RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 DEPTORQ8TB45 409 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 PRPF31Q8WWY3 499 aaKnown RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 NSRP1Q9H0G5 558 aaKnown RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 MRPL47Q9HD33 250 aaKnown RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 RGS17Q9UGC6 210 aaPredicted RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 HMGXB4Q9UGU5 601 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 RASA4BC9J798 803 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 GOLGA8SH3BPF8 625 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 GOLGA8MH3BSY2 632 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 RASA4O43374 803 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 KRT1P04264 644 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 IQCF3P0C7M6 154 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 RFC1P35251 1148 aaPredicted RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 RAP1GAPP47736 663 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 ATP11AP98196 1134 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 GPS1Q13098 491 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 MTFR1Q15390 333 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 SLC1A5Q15758 541 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 LIN9Q5TKA1 542 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 GPAT2Q6NUI2 795 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 DRICH1Q6PGQ1 229 aaPredicted RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 TRIM72Q6ZMU5 477 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 DEFB132Q7Z7B7 95 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 C4orf33Q8N1A6 199 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 ZNF276Q8N554 614 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 TRPM4Q8TD43 1214 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 MAK16Q9BXY0 300 aaKnown RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 ECT2Q9H8V3 914 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 BTBD7Q9P203 1132 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 IGF2BP3O00425 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
COPB1-201ENST00000249923 ABHD2P08910 425 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 RPA3P35244 121 aaPredicted RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 FNBP1LQ5T0N5 605 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 ANGEL2Q5VTE6 544 aaKnown RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 ZNF772Q68DY9 489 aaPredicted RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 DENND1BQ6P3S1 775 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 LONP2Q86WA8 852 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 SLC35B2Q8TB61 432 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 MAIP1Q8WWC4 291 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 MIEF2Q96C03 454 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 KLRG1Q96E93 195 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 MAGEB18Q96M61 343 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 ZCWPW1Q9H0M4 648 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 CPSF2Q9P2I0 782 aaKnown RBP10.66□□□□□ -0.7
COPB1-201ENST00000249923 POLIQ9UNA4 740 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 SCINQ9Y6U3 715 aa10.66□□□□□ -0.7
COPB1-201ENST00000249923 OTOFQ9HC10 1997 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 SOWAHBA6NEL2 793 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 B4GALT5O43286 388 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 TYROBPO43914 113 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 LRCH4O75427 683 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 ALADP13716 330 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 CALRP27797 417 aaKnown RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 RNASELQ05823 741 aaKnown RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 DNAJC3Q13217 504 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 MOGSQ13724 837 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 ZNF268Q14587 947 aaPredicted RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 GSTA5Q7RTV2 222 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 MZB1Q8WU39 189 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 TWNKQ96RR1 684 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 SDCBP2Q9H190 292 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 GINM1Q9NU53 330 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 IP6K2Q9UHH9 426 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 MCM3APO60318 1980 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 POC1B-GALNT4F8VUJ3 575 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 SMIM24O75264 130 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 NQO1P15559 274 aaKnown RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 TBXAS1P24557 533 aaPredicted RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 CDH5P33151 784 aaPredicted RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 VCPP55072 806 aaKnown RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 POLE2P56282 527 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 LY6KQ17RY6 165 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 TLDC1Q6P9B6 456 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 AGGF1Q8N302 714 aaeCLIP10.65□□□□□ -0.7
COPB1-201ENST00000249923 LRRC71Q8N4P6 559 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 MAGEC3Q8TD91 643 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 SLC7A3Q8WY07 619 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 ARHGEF3Q9NR81 526 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 CPSF3Q9UKF6 684 aaKnown RBP10.65□□□□□ -0.7
COPB1-201ENST00000249923 ZNF148Q9UQR1 794 aa10.65□□□□□ -0.7
COPB1-201ENST00000249923 TMEM63AO94886 807 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 STAT4Q14765 748 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 PLEKHG4Q58EX7 1191 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CDCA2Q69YH5 1023 aaPredicted RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 EEPD1Q7L9B9 569 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ANKMY2Q8IV38 441 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ZBED8Q8IZ13 594 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 RCOR2Q8IZ40 523 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 EMC1Q8N766 993 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CXorf38Q8TB03 319 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 AGAP11Q8TF27 550 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 NKD2Q969F2 451 aaPredicted RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 FGD4Q96M96 766 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ACO2Q99798 780 aaKnown RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 MINDY3Q9H8M7 445 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ETNK1Q9HBU6 452 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 UBN1Q9NPG3 1134 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CHKBQ9Y259 395 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms