RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 ASB14A6NK59 587 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 NEBLO76041 1014 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 FAM107AO95990 144 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 SURF1Q15526 300 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 TAPT1Q6NXT6 567 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 TMEM121Q9BTD3 319 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 TNFSF13BQ9Y275 285 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 GOLGA8MH3BSY2 632 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 GRAP2O75791 330 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 KRT3P12035 628 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 RAD23BP54727 409 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 CCNG2Q16589 344 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 KIZQ2M2Z5 673 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 SPOCD1Q6ZMY3 1216 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 HEXIM2Q96MH2 286 aaKnown RBP16.63■□□□□ 0.25
LRFN1-201ENST00000248668 ELOVL4Q9GZR5 314 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 PDZD7Q9H5P4 517 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 MGAMO43451 1857 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 SIP14410 1827 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 M0QYV0 167 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 CETN2P41208 172 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 TAF5Q15542 800 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 RHBDF2Q6PJF5 856 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 CPLX4Q7Z7G2 160 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 TRAIPQ9BWF2 469 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 DICER1Q9UPY3 1922 aaKnown RBP16.62■□□□□ 0.25
LRFN1-201ENST00000248668 BRCA2P51587 3418 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 H0YHG0 523 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 CD48P09326 243 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 IL1R2P27930 398 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 SLC10A6Q3KNW5 377 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 C6orf118Q5T5N4 469 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 DPP9Q86TI2 863 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 ADAM7Q9H2U9 754 aa16.62■□□□□ 0.25
LRFN1-201ENST00000248668 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
LRFN1-201ENST00000248668 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.62■□□□□ 0.25
LRFN1-201ENST00000248668 TCRBV5S1A1TA0A578 114 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 LSM8O95777 96 aaKnown RBP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 ERBB2P04626 1255 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 ARSEP51690 589 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 GRM1Q13255 1194 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 RAB6CQ53S08 254 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 ANKRD42Q8N9B4 389 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 SLCO2A1Q92959 643 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 PRMT1Q99873 361 aaKnown RBP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 RAB6CQ9H0N0 254 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 NINJ2Q9NZG7 142 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 HES2Q9Y543 173 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 CAPN7Q9Y6W3 813 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 KIAA0754O94854 1291 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 GH1P01241 217 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 SLC26A2P50443 739 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 GPS1Q13098 491 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 EXOC8Q8IYI6 725 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 RCOR2Q8IZ40 523 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 C12orf29Q8N999 325 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 SLC4A11Q8NBS3 891 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 C3orf20Q8ND61 904 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 HSPH1Q92598 858 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 PGM2Q96G03 612 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 XPO6Q96QU8 1125 aaKnown RBP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 CD248Q9HCU0 757 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 CCL15-CCL14A0A0B4J2E2 113 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 H3BRB1 525 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 SGK1O00141 431 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 LIASO43766 372 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 BANF1O75531 89 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 EIF4BP23588 611 aaKnown RBP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 NRLP54845 237 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 LAMC2Q13753 1193 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 CCL15Q16663 113 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 AMHR2Q16671 573 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 CDO1Q16878 200 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 GLRA4Q5JXX5 417 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 SPDYCQ5MJ68 293 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 SYCP2LQ5T4T6 812 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 ARFGAP1Q8N6T3 406 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 CCDC89Q8N998 374 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 HPDLQ96IR7 371 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 RBM41Q96IZ5 413 aaKnown RBP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 TUT1Q9H6E5 874 aaKnown RBP16.61■□□□□ 0.25
LRFN1-201ENST00000248668 KCNK9Q9NPC2 374 aa16.61■□□□□ 0.25
LRFN1-201ENST00000248668 PIAS1O75925 651 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 MAN1A1P33908 653 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 RGS7P49802 495 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 PTPN11Q06124 597 aaPredicted RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 FASTKD3Q14CZ7 662 aaKnown RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 SH3PXD2AQ5TCZ1 1133 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 USP50Q70EL3 339 aaPredicted RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 LENG1Q96BZ8 264 aaPredicted RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 APOL6Q9BWW8 343 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 INTS9Q9NV88 658 aaKnown RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 SETD4Q9NVD3 440 aa16.6■□□□□ 0.25
LRFN1-201ENST00000248668 DDX20Q9UHI6 824 aaKnown RBP16.6■□□□□ 0.25
LRFN1-201ENST00000248668 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms