RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PLEKHA7Q6IQ23 1121 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 C1orf228Q6PIY5 440 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 CRELD2Q6UXH1 353 aaPredicted RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 ZCCHC9Q8N567 271 aaKnown RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 CCDC33Q8N5R6 958 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 UBA3Q8TBC4 463 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 LRRN4Q8WUT4 740 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 GREB1LQ9C091 1923 aaPredicted RBP13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 M0QYV0 167 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 KRT16P08779 473 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 FOXN2P32314 431 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 VCPP55072 806 aaKnown RBP13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 TTC25Q96NG3 672 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 A0A0B4J269 797 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 GSTA1P08263 222 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 MMP8P22894 467 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 CLCN3P51790 818 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 EIF3EP60228 445 aaKnown RBP13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 KRT81Q14533 505 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 DENND1BQ6P3S1 775 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 AGAP11Q8TF27 550 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 NSMCE1Q8WV22 266 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 MT-ND3P03897 115 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 INHBAP08476 426 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 RBP3P10745 1247 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 RGS7P49802 495 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 PIGHQ14442 188 aaPredicted RBP13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 BSPRYQ5W0U4 402 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 PHF13Q86YI8 300 aaPredicted RBP13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 JOSD2Q8TAC2 188 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 TFAP2BQ92481 460 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 RPF1Q9H9Y2 349 aaKnown RBP13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 UBN1Q9NPG3 1134 aa13.26□□□□□ -0.29
RAB3IP-201ENST00000247833 TMEM191CA6NGB0 347 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 SPATA31C2B4DYI2 1134 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 ADCY3O60266 1144 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 TOM1L1O75674 476 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 CXCL8P10145 99 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 TROVE2P10155 538 aaKnown RBP eCLIP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 ATP4AP20648 1035 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 ELF1P32519 619 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 CDH6P55285 790 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 WDR4P57081 412 aaKnown RBP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 OGDHQ02218 1023 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 CCDC6Q16204 474 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 PPP6R3Q5H9R7 873 aaPredicted RBP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 FBXO36Q8NEA4 188 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 ADPGKQ9BRR6 497 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 PSMC3IPQ9P2W1 217 aaPredicted RBP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 MAD1L1Q9Y6D9 718 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 LRRC37AA6NMS7 1700 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 A0A1B0GUA9 196 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 ANP32DO95626 131 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 TAC1P20366 129 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 TGFB2P61812 414 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 IRX4P78413 519 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 ATP11CQ8NB49 1132 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 SPATA18Q8TC71 538 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 TXLNGQ9NUQ3 528 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 XPO7Q9UIA9 1087 aaKnown RBP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 OGTO15294 1046 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 B4GALT5O43286 388 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 EDN1P05305 212 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 ABCD1P33897 745 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 KLF1Q13351 362 aaPredicted RBP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 BRSK2Q8IWQ3 736 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 SEPT1Q8WYJ6 367 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 VCPIP1Q96JH7 1222 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 FAM167BQ9BTA0 163 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 MYLK2Q9H1R3 596 aa13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 NOP53Q9NZM5 478 aaKnown RBP13.25□□□□□ -0.29
RAB3IP-201ENST00000247833 CBX6O95503 412 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 CD48P09326 243 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 ADRA1DP25100 572 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 LAMTOR4Q0VGL1 99 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 FAM228AQ86W67 206 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 ECHDC2Q86YB7 292 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 SLCO2A1Q92959 643 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 AKT3Q9Y243 479 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 COL11A2P13942 1736 aaPredicted RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 hCG_1818297A0A087WSY0 165 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 TP73O15350 636 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 ASS1P00966 412 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 RNASELQ05823 741 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 MTFR1Q15390 333 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 ANKRD22Q5VYY1 191 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 ALLCQ8N6M5 410 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 PPM1NQ8N819 430 aa13.24□□□□□ -0.29
RAB3IP-201ENST00000247833 FAF2Q96CS3 445 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms