RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PI4K2BG5E9Z4 385 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 MAGEB2O15479 319 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 MED7O43513 233 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 TJP3O95049 919 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 TNFAIP2Q03169 654 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 SPRED3Q2MJR0 410 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 PTPN20Q4JDL3 420 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 MAMDC4Q6UXC1 1216 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 PARP9Q8IXQ6 854 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 LRRC34Q8IZ02 419 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 MAGEC3Q8TD91 643 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 FAM118BQ9BPY3 351 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 FHDC1Q9C0D6 1143 aaPredicted RBP23.12■■□□□ 1.29
RNF39-201ENST00000244360 VRTNQ9H8Y1 702 aa23.12■■□□□ 1.29
RNF39-201ENST00000244360 NXF1Q9UBU9 619 aaKnown RBP23.12■■□□□ 1.29
RNF39-201ENST00000244360 RBM47A0AV96 593 aaKnown RBP23.11■■□□□ 1.29
RNF39-201ENST00000244360 LACTBL1A8MY62 500 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 TCEA3O75764 348 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 STAG3L1P0CL83 205 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 RAD23BP54727 409 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 CYP4A22Q5TCH4 519 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 POLNQ7Z5Q5 900 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 CCHCR1Q8TD31 782 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 EMID1Q96A84 441 aaPredicted RBP23.11■■□□□ 1.29
RNF39-201ENST00000244360 FOXP3Q9BZS1 431 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 SDCBP2Q9H190 292 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 PDZD7Q9H5P4 517 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 VTA1Q9NP79 307 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 PNMA3Q9UL41 463 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 COL1A2P08123 1366 aa23.11■■□□□ 1.29
RNF39-201ENST00000244360 hCG_1818297A0A087WSY0 165 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 KRT10P13645 584 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 POLR2BP30876 1174 aaKnown RBP23.1■■□□□ 1.29
RNF39-201ENST00000244360 SLCO1A2P46721 670 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 C9orf131Q5VYM1 1079 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 IZUMO3Q5VZ72 239 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 HIBCHQ6NVY1 386 aaPredicted RBP23.1■■□□□ 1.29
RNF39-201ENST00000244360 FNIP1Q8TF40 1166 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 HAUS2Q9NVX0 235 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 CYTH4Q9UIA0 394 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 SIGLEC16A6NMB1 481 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 ACSL3O95573 720 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 GH1P01241 217 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 VIMP08670 466 aaKnown RBP23.1■■□□□ 1.29
RNF39-201ENST00000244360 RAP1GAPP47736 663 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 TXNRD3NBQ6F5E7 133 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 PPTC7Q8NI37 304 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 ASB7Q9H672 318 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 NINJ2Q9NZG7 142 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 EVPLQ92817 2033 aa23.1■■□□□ 1.29
RNF39-201ENST00000244360 KRT19P08727 400 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 CYP2C8P10632 490 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 ATICP31939 592 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 EPHX2P34913 555 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 CDKN2BP42772 138 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 VPS41P49754 854 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 IGBP1P78318 339 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 EAPPQ56P03 285 aaPredicted RBP23.09■■□□□ 1.29
RNF39-201ENST00000244360 JADE1Q6IE81 842 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 EXOC3L1Q86VI1 746 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 DNPEPQ9ULA0 475 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 SLC12A4Q9UP95 1085 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 DRG1Q9Y295 367 aaKnown RBP23.09■■□□□ 1.29
RNF39-201ENST00000244360 A0A087WZ62 844 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 CD19P15391 556 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 WDR72Q3MJ13 1102 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 TFDP3Q5H9I0 405 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 GJC2Q5T442 439 aaPredicted RBP23.09■■□□□ 1.29
RNF39-201ENST00000244360 RPAINQ86UA6 219 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 SLC4A11Q8NBS3 891 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 GPRC5AQ8NFJ5 357 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 FDXACB1Q9BRP7 624 aaPredicted RBP23.09■■□□□ 1.29
RNF39-201ENST00000244360 CYP3A43Q9HB55 503 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 SPON1Q9HCB6 807 aa23.09■■□□□ 1.29
RNF39-201ENST00000244360 KYAT1Q16773 422 aa23.08■■□□□ 1.29
RNF39-201ENST00000244360 ZCCHC9Q8N567 271 aaKnown RBP23.08■■□□□ 1.29
RNF39-201ENST00000244360 ALLCQ8N6M5 410 aa23.08■■□□□ 1.29
RNF39-201ENST00000244360 NKD2Q969F2 451 aaPredicted RBP23.08■■□□□ 1.29
RNF39-201ENST00000244360 SMYD3Q9H7B4 428 aa23.08■■□□□ 1.29
RNF39-201ENST00000244360 C3orf70A6NLC5 250 aaPredicted RBP23.08■■□□□ 1.28
RNF39-201ENST00000244360 CILPO75339 1184 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 ITGB3P05106 788 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 ATF7P17544 494 aaPredicted RBP23.08■■□□□ 1.28
RNF39-201ENST00000244360 RFC1P35251 1148 aaPredicted RBP23.08■■□□□ 1.28
RNF39-201ENST00000244360 CCNA1P78396 465 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 SLC25A11Q02978 314 aaKnown RBP23.08■■□□□ 1.28
RNF39-201ENST00000244360 OASLQ15646 514 aaKnown RBP23.08■■□□□ 1.28
RNF39-201ENST00000244360 KYNUQ16719 465 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 KAZNQ674X7 775 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 CEP128Q6ZU80 1094 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 DYDC1Q8WWB3 177 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 ARHGEF2Q92974 986 aaKnown RBP23.08■■□□□ 1.28
RNF39-201ENST00000244360 KATNBL1Q9H079 304 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 WDR35Q9P2L0 1181 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 EFR3BQ9Y2G0 817 aa23.08■■□□□ 1.28
RNF39-201ENST00000244360 CDH8P55286 799 aa23.07■■□□□ 1.28
RNF39-201ENST00000244360 LONRF1Q17RB8 773 aa23.07■■□□□ 1.28
RNF39-201ENST00000244360 GSTA5Q7RTV2 222 aa23.07■■□□□ 1.28
RNF39-201ENST00000244360 TRPM8Q7Z2W7 1104 aa23.07■■□□□ 1.28
RNF39-201ENST00000244360 TWNKQ96RR1 684 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms