RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 NUB1Q9Y5A7 615 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 SNCAIPQ9Y6H5 919 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 IVNS1ABPQ9Y6Y0 642 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 WDR64B1ANS9 1081 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 FAM155BO75949 473 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 CBX6O95503 412 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 KRT19P08727 400 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 GDF10P55107 478 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 INHBEP58166 350 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 C11orf91Q3C1V1 193 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 BANPQ8N9N5 519 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 FEZF2Q8TBJ5 459 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 LRRN4Q8WUT4 740 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 TTC25Q96NG3 672 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 SAYSD1Q9NPB0 183 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 RPL26L1Q9UNX3 145 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 RIPK3Q9Y572 518 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 EXOC1LA0A1B0GW35 172 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 DPEP1P16444 411 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 ATP4AP20648 1035 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 EPHB2P29323 1055 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 NSFP46459 744 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 TUBP50607 506 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 CLNKQ7Z7G1 428 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 RCOR2Q8IZ40 523 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 CCDC33Q8N5R6 958 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 RDM1Q8NG50 284 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 ZNF398Q8TD17 642 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 NRG4Q8WWG1 115 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 ZBTB45Q96K62 511 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 LRRC37BQ96QE4 947 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 NKIRAS1Q9NYS0 192 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 SSC5DA1L4H1 1573 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 SRGAP2CP0DJJ0 459 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 MCL1Q07820 350 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 TTLL12Q14166 644 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 FKBP1CQ5VVH2 108 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 ANKRD22Q5VYY1 191 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 KIAA0319LQ8IZA0 1049 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 C4orf33Q8N1A6 199 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 TTC8Q8TAM2 541 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 SKA1Q96BD8 255 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 TRIM6Q9C030 488 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 SENP1Q9P0U3 644 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
SEC61A1-201ENST00000243253 F8VP50 259 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 GLRA2P23416 452 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 VCPP55072 806 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 SPARCL1Q14515 664 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 CES4AQ5XG92 561 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 SNRNP48Q6IEG0 339 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 TRIM72Q6ZMU5 477 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 SPOCD1Q6ZMY3 1216 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 CPT1BQ92523 772 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 PRR11Q96HE9 360 aaPredicted RBP12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 PLAC1Q9HBJ0 212 aa12.58□□□□□ -0.39
SEC61A1-201ENST00000243253 DNAJC6O75061 913 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 IL1BP01584 269 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 CD19P15391 556 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 ARSEP51690 589 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 KRT76Q01546 638 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 TAF1BQ53T94 588 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 WASHC2DQ5SRD0 308 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 RFWD3Q6PCD5 774 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 REPS2Q8NFH8 660 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 RFWD2Q8NHY2 731 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 RAB3IPQ96QF0 476 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 CADM1Q9BY67 442 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 TCRBV7S3A2A0A539 114 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 NAA25Q14CX7 972 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 NBPF12Q5TAG4 269 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF365Q70YC5 407 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 VSIG10LQ86VR7 867 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF483Q8TF39 744 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 SAR1AQ9NR31 198 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 C1orf112Q9NSG2 853 aa12.58□□□□□ -0.4
SEC61A1-201ENST00000243253 WDR91A4D1P6 747 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 TMEM270Q6UE05 265 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 C4orf50Q6ZRC1 276 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 EP400NLQ6ZTU2 488 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 TTLL6Q8N841 843 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 OR5B17Q8NGF7 314 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 PPCSQ9HAB8 311 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 PCDH9Q9HC56 1237 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 MRPL47Q9HD33 250 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 PARVAQ9NVD7 372 aa12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 NXF1Q9UBU9 619 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-201ENST00000243253 ZSWIM8A7E2V4 1837 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms