RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 KCNK17Q96T54 332 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 XPO4Q9C0E2 1151 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 ACTR5Q9H9F9 607 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 ETNK1Q9HBU6 452 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PANK4Q9NVE7 773 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 WRAP73Q9P2S5 460 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 IMPACTQ9P2X3 320 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TMCO1Q9UM00 188 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PPP2R2CQ9Y2T4 447 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 GPR52Q9Y2T5 361 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 COL1A2P08123 1366 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 BAZ2BQ9UIF8 2168 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 GOLGA6L4A6NEF3 574 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 KPNA6O60684 536 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 DXOO77932 396 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 GH1P01241 217 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 MUTP22033 750 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 MCM3P25205 808 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TCF7P36402 384 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 MATR3P43243 847 aaKnown RBP eCLIP3.88□□□□□ -1.79
UFM1-201ENST00000239878 ACLYP53396 1101 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 GUCY1A3Q02108 690 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TNFAIP2Q03169 654 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ITIH3Q06033 890 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 LAMC2Q13753 1193 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TTLL4Q14679 1199 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 STAT4Q14765 748 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 COBLL1Q53SF7 1204 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TTMPQ5BVD1 217 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ANKRD20A2Q5SQ80 823 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ANKRD20A1Q5TYW2 823 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 RASIP1Q5U651 963 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ANKRD20A3Q5VUR7 823 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 RNF219Q5W0B1 726 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 LMBRD2Q68DH5 695 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 HIBCHQ6NVY1 386 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 NFRKBQ6P4R8 1299 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CRELD2Q6UXH1 353 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 EEPD1Q7L9B9 569 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 MAATS1Q7Z4T9 603 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NEK8Q86SG6 692 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 LRRTM3Q86VH5 581 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 BPHLQ86WA6 291 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 GALNT12Q8IXK2 581 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CRIPAKQ8N1N5 446 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 AOPEPQ8N6M6 819 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 GIMAP8Q8ND71 665 aaPredicted RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 FBXO27Q8NI29 283 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 DYDC1Q8WWB3 177 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 DDX1Q92499 740 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 COPS5Q92905 334 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 IFT43Q96FT9 208 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CDHR1Q96JP9 859 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 PGBD1Q96JS3 809 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SNX27Q96L92 541 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 FAM20AQ96MK3 541 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SH3GL1Q99961 368 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 HSD17B14Q9BPX1 270 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 C1QTNF2Q9BXJ5 285 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TMEM60Q9H2L4 133 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ALG13Q9NP73 1137 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 MRGBPQ9NV56 204 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 NOP53Q9NZM5 478 aaKnown RBP3.88□□□□□ -1.79
UFM1-201ENST00000239878 TBX21Q9UL17 535 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 CHMP2BQ9UQN3 213 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 SSX2IPQ9Y2D8 614 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 TMED5Q9Y3A6 229 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 ITIH6Q6UXX5 1313 aa3.88□□□□□ -1.79
UFM1-201ENST00000239878 A0A0U1RQJ8 604 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 A6NNZ2 444 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 LAD1O00515 517 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 KIAA0355O15063 1070 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 CABYRO75952 493 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 GNA14O95837 355 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 HNRNPCP07910 306 aaKnown RBP eCLIP3.87□□□□□ -1.79
UFM1-201ENST00000239878 PDHA1P08559 390 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 SPATA31C1P0DKV0 1188 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 EN2P19622 333 aaPredicted RBP3.87□□□□□ -1.79
UFM1-201ENST00000239878 SP100P23497 879 aaPredicted RBP3.87□□□□□ -1.79
UFM1-201ENST00000239878 LSP1P33241 339 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 ARPC4P59998 168 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 ITKQ08881 620 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 SLMAPQ14BN4 828 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 KARSQ15046 597 aaKnown RBP3.87□□□□□ -1.79
UFM1-201ENST00000239878 SAFBQ15424 915 aaKnown RBP eCLIP3.87□□□□□ -1.79
UFM1-201ENST00000239878 TAF11Q15544 211 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 PPP2R5EQ16537 467 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 FSCN1Q16658 493 aaKnown RBP3.87□□□□□ -1.79
UFM1-201ENST00000239878 LRRC26Q2I0M4 334 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 HSDL1Q3SXM5 330 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 TMEM119Q4V9L6 283 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 GJC2Q5T442 439 aaPredicted RBP3.87□□□□□ -1.79
UFM1-201ENST00000239878 MZT2BQ6NZ67 158 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 CNNM4Q6P4Q7 775 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 ZBTB33Q86T24 672 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 ZBTB46Q86UZ6 589 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 NLRP8Q86W28 1048 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 SH2D3CQ8N5H7 860 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 MYCBPAPQ8TBZ2 947 aa3.87□□□□□ -1.79
UFM1-201ENST00000239878 COG1Q8WTW3 980 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms