RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SEPT11Q9NVA2 429 aaKnown RBP14.04□□□□□ -0.16
SLIRP-201ENST00000238688 DPP3Q9NY33 737 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 SIX4Q9UIU6 781 aa14.04□□□□□ -0.16
SLIRP-201ENST00000238688 TULP1O00294 542 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 ZNF623O75123 536 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 ABL1P00519 1130 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 PNMA6AP0CW24 399 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 UNGP13051 313 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 MCM3P25205 808 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 DNAJB1P25685 340 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 CDH5P33151 784 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 PAFAH1B1P43034 410 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 ASPAP45381 313 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 NOP2P46087 812 aaKnown RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 NSFP46459 744 aaKnown RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 PTPROQ16827 1216 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 LEXMQ3ZCV2 418 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 SEZ6Q53EL9 994 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 LIN9Q5TKA1 542 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 PHF13Q86YI8 300 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 GPR161Q8N6U8 529 aaKnown RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 SLC20A1Q8WUM9 679 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 KIF12Q96FN5 646 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 RPS6KC1Q96S38 1066 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 ADAM2Q99965 735 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 LHX5Q9H2C1 402 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 MRPL47Q9HD33 250 aaKnown RBP14.03□□□□□ -0.16
SLIRP-201ENST00000238688 CD320Q9NPF0 282 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 RNF19AQ9NV58 838 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 SCINQ9Y6U3 715 aa14.03□□□□□ -0.16
SLIRP-201ENST00000238688 PALMO75781 387 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 CST3P01034 146 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-201ENST00000238688 ATP1A1P05023 1023 aaKnown RBP14.02□□□□□ -0.17
SLIRP-201ENST00000238688 ITGB3P05106 788 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 ITGB1P05556 798 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 MMEP08473 750 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 LTBRP36941 435 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 OSTNP61366 133 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 TNNC1P63316 161 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 RPS6KA1Q15418 735 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 PPP2R5EQ16537 467 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 CFAP221Q4G0U5 840 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 PAN2Q504Q3 1202 aaKnown RBP14.02□□□□□ -0.17
SLIRP-201ENST00000238688 TIGD5Q53EQ6 642 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 CCDC70Q6NSX1 233 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 DPH6Q7L8W6 267 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 UNC93AQ86WB7 457 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 TMEM35BQ8NCS4 154 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 SLC35G2Q8TBE7 412 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 SPATA18Q8TC71 538 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 SPPL3Q8TCT6 385 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 HPDLQ96IR7 371 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 ZNF668Q96K58 619 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-201ENST00000238688 NAP1L3Q99457 506 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-201ENST00000238688 SELENOOQ9BVL4 669 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 PLVAPQ9BX97 442 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 TLR10Q9BXR5 811 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 LMAN2LQ9H0V9 348 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 PDCL3Q9H2J4 239 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 NSUN3Q9H649 340 aaKnown RBP14.02□□□□□ -0.17
SLIRP-201ENST00000238688 ALG13Q9NP73 1137 aaKnown RBP14.02□□□□□ -0.17
SLIRP-201ENST00000238688 HCSTQ9UBK5 93 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 SALL4Q9UJQ4 1053 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 STRIP2Q9ULQ0 834 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 GIT1Q9Y2X7 761 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 RWDD3Q9Y3V2 267 aa14.02□□□□□ -0.17
SLIRP-201ENST00000238688 CSDE1O75534 798 aaKnown RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 RECQL4O94761 1208 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 CLSTN1O94985 981 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 CALB1P05937 261 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 KRT19P08727 400 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 KCNA5P22460 613 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 LRPAP1P30533 357 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 SLC1A1P43005 524 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 GSCP56915 257 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 SNX16P57768 344 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 CTC1Q2NKJ3 1217 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 WDR72Q3MJ13 1102 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 TWF2Q6IBS0 349 aaKnown RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 SLC24A5Q71RS6 500 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 RSRC2Q7L4I2 434 aaKnown RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 PEX26Q7Z412 305 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 MRPL10Q7Z7H8 261 aaKnown RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 KHSRPQ92945 711 aaKnown RBP eCLIP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 OSBPL9Q96SU4 736 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 ARID3AQ99856 593 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 C11orf84Q9BUA3 381 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 CARD6Q9BX69 1037 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 ABCB6Q9NP58 842 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 ARGLU1Q9NWB6 273 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 GDAP2Q9NXN4 497 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 AMFRQ9UKV5 643 aa14.01□□□□□ -0.17
SLIRP-201ENST00000238688 TTC7AQ9ULT0 858 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 BARX2Q9UMQ3 279 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-201ENST00000238688 SCN1AP35498 2009 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms