RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 STRIP2Q9ULQ0 834 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 ANO9A1A5B4 782 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 SART1O43290 800 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 CALB1P05937 261 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 BDNFP23560 247 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 KIF11P52732 1056 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 CLDN10P78369 228 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 PLD1Q13393 1074 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZBTB6Q15916 424 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZNF606Q8WXB4 792 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 FAM161BQ96MY7 647 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 SLITRK1Q96PX8 696 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 C11orf70Q9BRQ4 267 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 GPR62Q9BZJ7 368 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 FAM189A1O60320 539 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 WARSP23381 471 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 ACADSBP45954 432 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 XKR4Q5GH76 650 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 SND1Q7KZF4 910 aaKnown RBP eCLIP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 SLC47A2Q86VL8 602 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 LRRC8AQ8IWT6 810 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 HSD3B7Q9H2F3 369 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 TSPAN16Q9UKR8 245 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 STXBP5LQ9Y2K9 1186 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 RPL17P18621 184 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 MAP3K7CLP57077 242 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 CYP4A22Q5TCH4 519 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 CCDC181Q5TID7 509 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 C16orf59Q7L2K0 433 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 SLC39A11Q8N1S5 342 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 AUTS2Q8WXX7 1259 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 SHC3Q92529 594 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 C18orf8Q96DM3 657 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 MRPL47Q9HD33 250 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 HCSTQ9UBK5 93 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 GUCA1BQ9UMX6 200 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 CILPO75339 1184 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 ACO1P21399 889 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 GPNMBQ14956 572 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 C1orf220Q5T0J3 134 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 SPPL2BQ8TCT7 592 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 GANQ9H2C0 597 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 DMAP1Q9NPF5 467 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 XYLBO75191 536 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 OR4Q2P0C623 313 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 CCDC130P13994 396 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 MYOGP15173 224 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 NDUFV1P49821 464 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 CDR2Q01850 454 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 UBE3AQ05086 875 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 DSC1Q08554 894 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 ADCY1Q08828 1119 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 BST2Q10589 180 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 INTS6LQ5JSJ4 861 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 C10orf76Q5T2E6 689 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 PHLDB2Q86SQ0 1253 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 SPATA18Q8TC71 538 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 MYLPFQ96A32 169 aa11.78□□□□□ -0.52
TNFAIP3-201ENST00000237289 LINC01553A4QN01 128 aa11.77□□□□□ -0.52
TNFAIP3-201ENST00000237289 GJC1P36383 396 aa11.77□□□□□ -0.52
TNFAIP3-201ENST00000237289 BTBD8Q5XKL5 378 aa11.77□□□□□ -0.52
TNFAIP3-201ENST00000237289 CPA5Q8WXQ8 436 aa11.77□□□□□ -0.52
TNFAIP3-201ENST00000237289 KREMEN1Q96MU8 473 aa11.77□□□□□ -0.52
TNFAIP3-201ENST00000237289 VRTNQ9H8Y1 702 aa11.77□□□□□ -0.52
TNFAIP3-201ENST00000237289 SPTLC3Q9NUV7 552 aa11.77□□□□□ -0.52
TNFAIP3-201ENST00000237289 PIK3R2O00459 728 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 SETSIPP0DME0 302 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 RALAP11233 206 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 PDE12Q6L8Q7 609 aaKnown RBP11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 CCDC117Q8IWD4 279 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 TRIM62Q9BVG3 475 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 LZTFL1Q9NQ48 299 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 SYNJ2BP-COX16A0A087WUM0 186 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 TMEM189-UBE2V1I3L0A0 370 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 TRIM66O15016 1216 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 FTLP02792 175 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 ASPAP45381 313 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 DNA2P51530 1060 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 C15orf39Q6ZRI6 1047 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 XYLT2Q9H1B5 865 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 CXCL16Q9H2A7 254 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 COX16Q9P0S2 106 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 USTQ9Y2C2 406 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
TNFAIP3-201ENST00000237289 SPTLC1O15269 473 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 RNF8O76064 485 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SPATA31D3P0C874 917 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 LMO2P25791 158 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 CNGA2Q16280 664 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SPATA31D4Q6ZUB0 917 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 FAM71AQ8IYT1 594 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 ATAD1Q8NBU5 361 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms