RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FIS1Q9Y3D6 152 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 MYO5CQ9NQX4 1742 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 PDZK1P1A8MUH7 402 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 RAD23AP54725 363 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 KNOP1Q1ED39 458 aaKnown RBP13.42□□□□□ -0.26
VAMP4-201ENST00000236192 SPRED3Q2MJR0 410 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 OTOAQ7RTW8 1153 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 AMIGO2Q86SJ2 522 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 DGKHQ86XP1 1220 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 CDHR1Q96JP9 859 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 ARPC5LQ9BPX5 153 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 IQGAP3Q86VI3 1631 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 SEMA3DO95025 777 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 PKN2Q16513 984 aaKnown RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 GALNTL6Q49A17 601 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 PDPK2PQ6A1A2 396 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 SPOPLQ6IQ16 392 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 ART4Q93070 314 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 SLCO1B3Q9NPD5 702 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 MAP3K4Q9Y6R4 1608 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 KPNA2P52292 529 aaKnown RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 DSTYKQ6XUX3 929 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 FASTKD5Q7L8L6 764 aaKnown RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 NEDD1Q8NHV4 660 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 EHD1Q9H4M9 534 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 IARS2Q9NSE4 1012 aaKnown RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 SORBS3O60504 671 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 ZBED1O96006 694 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 WEE2P0C1S8 567 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 NEK3P51956 506 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 AQP4P55087 323 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 ALLCQ8N6M5 410 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 RNF38Q9H0F5 515 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 SLC8A2Q9UPR5 921 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 PROCP04070 461 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 CYP2C9P11712 490 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 SAT1P21673 171 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 TPTEP56180 551 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 ZNF394Q53GI3 561 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 ZNF571Q7Z3V5 609 aaPredicted RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 MICU2Q8IYU8 434 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 ADCY4Q8NFM4 1077 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 EPS8L2Q9H6S3 715 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 C12orf4Q9NQ89 552 aa13.41□□□□□ -0.26
VAMP4-201ENST00000236192 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
VAMP4-201ENST00000236192 PNPLA7Q6ZV29 1317 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 PSMD11O00231 422 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 SRP72O76094 671 aaKnown RBP13.4□□□□□ -0.26
VAMP4-201ENST00000236192 CEP152O94986 1710 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 SLC9A1P19634 815 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 SERPINB9P50453 376 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 TMTC4Q5T4D3 741 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 CCDC33Q8N5R6 958 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 HDAC11Q96DB2 347 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 CITED4Q96RK1 184 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 EFCAB1Q9HAE3 211 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 DENND2AQ9ULE3 1009 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 ZBTB1Q9Y2K1 713 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 MYO3BQ8WXR4 1341 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 CAPN8A6NHC0 703 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
VAMP4-201ENST00000236192 SLC16A3O15427 465 aaKnown RBP13.4□□□□□ -0.26
VAMP4-201ENST00000236192 TEX28O15482 410 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
VAMP4-201ENST00000236192 PSTPIP1O43586 416 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 WBP4O75554 376 aaKnown RBP13.4□□□□□ -0.26
VAMP4-201ENST00000236192 PHC1P78364 1004 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 NCOA4Q13772 614 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 ALX1Q15699 326 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 KIF19Q2TAC6 998 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 ZNF746Q6NUN9 644 aaPredicted RBP13.4□□□□□ -0.26
VAMP4-201ENST00000236192 KLHL35Q6PF15 583 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 AHI1Q8N157 1196 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 KYQ8NBH2 561 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 STRBPQ96SI9 672 aaKnown RBP13.4□□□□□ -0.26
VAMP4-201ENST00000236192 PAFAH2Q99487 392 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 PCYOX1Q9UHG3 505 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
VAMP4-201ENST00000236192 USP17L12C9JPN9 530 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 USP17L21D6R901 530 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 TRIM24O15164 1050 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 PEX1O43933 1283 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 DGKIO75912 1065 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 ADAMTS2O95450 1211 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 GSTT2P0CG29 244 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 GSTT2BP0CG30 244 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 ADRA1DP25100 572 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 BNC1Q01954 994 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 SPDYAQ5MJ70 313 aa13.4□□□□□ -0.27
VAMP4-201ENST00000236192 CLEC4FQ8N1N0 589 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms