RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
CDCA3-201ENST00000229265 OSGEPQ9NPF4 335 aa11.33□□□□□ -0.6
CDCA3-201ENST00000229265 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-201ENST00000229265 TAS2R14Q9NYV8 317 aa11.33□□□□□ -0.6
CDCA3-201ENST00000229265 WDR35Q9P2L0 1181 aa11.33□□□□□ -0.6
CDCA3-201ENST00000229265 CNOT8Q9UFF9 292 aaKnown RBP11.33□□□□□ -0.6
CDCA3-201ENST00000229265 STRIP2Q9ULQ0 834 aa11.33□□□□□ -0.6
CDCA3-201ENST00000229265 AKT3Q9Y243 479 aa11.33□□□□□ -0.6
CDCA3-201ENST00000229265 NUB1Q9Y5A7 615 aa11.33□□□□□ -0.6
CDCA3-201ENST00000229265 CDY2AQ9Y6F7 541 aa11.33□□□□□ -0.6
CDCA3-201ENST00000229265 PLXNA4Q9HCM2 1894 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 A6NNZ2 444 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 KRIT1O00522 736 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 THAP12O43422 761 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 GJB5O95377 273 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 EDN1P05305 212 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 WEE2P0C1S8 567 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 IGFBP4P22692 258 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 PAX3P23760 479 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 CHRNA3P32297 505 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 RFC2P35250 354 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 AARSP49588 968 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 GSCP56915 257 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 SNX16P57768 344 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 CASP8Q14790 479 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 FBXO47Q5MNV8 452 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 TMEM270Q6UE05 265 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 ZBTB33Q86T24 672 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 RPAINQ86UA6 219 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 THNSL1Q8IYQ7 743 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 MREGQ8N565 214 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 RBBP8NLQ8NC74 664 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 ZNF564Q8TBZ8 553 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 NLRP7Q8WX94 980 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 ARHGEF26Q96DR7 871 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 NCAPGQ9BPX3 1015 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 NUP85Q9BW27 656 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 XYLT2Q9H1B5 865 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 PDZD7Q9H5P4 517 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 FAM114A2Q9NRY5 505 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 RBM12Q9NTZ6 932 aaKnown RBP11.32□□□□□ -0.6
CDCA3-201ENST00000229265 COG5Q9UP83 839 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 TTC28Q96AY4 2481 aa11.32□□□□□ -0.6
CDCA3-201ENST00000229265 TMEM265A0A087WTH1 108 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 FSCN2O14926 492 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 GPR32O75388 356 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 ARF4P18085 180 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 MMP8P22894 467 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 CD52P31358 61 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 TNFSF9P41273 254 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 KCNQ1P51787 676 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 MYL6P60660 151 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 COPS2P61201 443 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 NOMO3P69849 1222 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 HTRA4P83105 476 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 PAK2Q13177 524 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 RAB30Q15771 203 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 CNGA2Q16280 664 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 SYDE1Q6ZW31 735 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 MON1BQ7L1V2 547 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 MICALL1Q8N3F8 863 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 FEZF2Q8TBJ5 459 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 AENQ8WTP8 325 aaKnown RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 ZNF653Q96CK0 615 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 CYFIP2Q96F07 1278 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 ZSWIM1Q9BR11 485 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 RAB17Q9H0T7 212 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 EPC1Q9H2F5 836 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 SLC28A3Q9HAS3 691 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 CISHQ9NSE2 258 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 ADAM22Q9P0K1 906 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 PCYOX1Q9UHG3 505 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 FNDC1Q4ZHG4 1894 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-201ENST00000229265 PTPRJQ12913 1337 aa11.31□□□□□ -0.6
CDCA3-201ENST00000229265 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
CDCA3-201ENST00000229265 TLL1O43897 1013 aa11.3□□□□□ -0.6
CDCA3-201ENST00000229265 TSPAN1O60635 241 aa11.3□□□□□ -0.6
CDCA3-201ENST00000229265 PROSCO94903 275 aa11.3□□□□□ -0.6
CDCA3-201ENST00000229265 UPP2O95045 317 aa11.3□□□□□ -0.6
CDCA3-201ENST00000229265 PFKMP08237 780 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms