RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 MBLAC1A4D2B0 266 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 HOXD8P13378 290 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 PRLRP16471 622 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 HOXA11P31270 313 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 PLTPP55058 493 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 BPIFB4P59827 614 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 RBP5P82980 135 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 IRF5Q13568 498 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 GLE1Q53GS7 698 aaKnown RBP12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 WNT8BQ93098 351 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 LRRC45Q96CN5 670 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 GAD1Q99259 594 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 CISHQ9NSE2 258 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 CACNG4Q9UBN1 327 aa12.39□□□□□ -0.43
TNFAIP1-201ENST00000226225 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 FOXO6A8MYZ6 492 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 HAS3O00219 553 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 GPR182O15218 404 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PDGFRBP09619 1106 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 BRD2P25440 801 aaKnown RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 POU5F1BQ06416 359 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 MESDQ14696 234 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 ZKSCAN8Q15776 578 aaPredicted RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 C1orf127Q8N9H9 656 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 ADAM2Q99965 735 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 C11orf70Q9BRQ4 267 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PADI3Q9ULW8 664 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PLXNB2O15031 1838 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PIK3R2O00459 728 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 KIF4AO95239 1232 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 POMCP01189 267 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 CHN1P15882 459 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 IFI16Q16666 785 aaKnown RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 ENOSF1Q7L5Y1 443 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 ASB7Q9H672 318 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PTPRHQ9HD43 1115 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PCDHB2Q9Y5E7 798 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 A8MUI8 341 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 MLH1P40692 756 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 NAB2Q15742 525 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PXYLP1Q8TE99 480 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 NFKBIZQ9BYH8 718 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 THAP2Q9H0W7 228 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 ACTR5Q9H9F9 607 aaPredicted RBP12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 TUBGCP4Q9UGJ1 667 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 USTQ9Y2C2 406 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 NR2E1Q9Y466 385 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 IPPQ9Y573 584 aa12.38□□□□□ -0.43
TNFAIP1-201ENST00000226225 RBBP6Q7Z6E9 1792 aaKnown RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 A0A0G2JMZ2 1700 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 XPOTO43592 962 aaKnown RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 UBAP2Q5T6F2 1119 aaKnown RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 MEI1Q5TIA1 1274 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 ZNF662Q6ZS27 426 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 CCDC197Q8NCU1 140 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 EPS8L1Q8TE68 723 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 HASPINQ8TF76 798 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 SHC3Q92529 594 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 AGO3Q9H9G7 860 aaKnown RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 SNX24Q9Y343 169 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 DIAPH2O60879 1101 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 ATP6V1G2O95670 118 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 FGGP02679 453 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 HSPA9P38646 679 aaKnown RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 CCNHP51946 323 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 CCL23P55773 120 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 JAM2P57087 298 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 ELF3P78545 371 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 GCNT1Q02742 428 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 KYAT1Q16773 422 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 ZNF618Q5T7W0 954 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 C6orf89Q6UWU4 347 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 LNX1Q8TBB1 728 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 CXCL16Q9H2A7 254 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 COQ4Q9Y3A0 265 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 LCTP09848 1927 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 MEIS3P2A8K0S8 358 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 GOLGA8SH3BPF8 625 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 SPOPO43791 374 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 B4GALT4O60513 344 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 CABYRO75952 493 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 GNRH1P01148 92 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 ATF7P17544 494 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 YWHAEP62258 255 aaKnown RBP12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 FAM71AQ8IYT1 594 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 LRRC34Q8IZ02 419 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 LINC01465Q8N7H1 131 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 ISCUQ9H1K1 167 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
TNFAIP1-201ENST00000226225 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms