RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 TSPAN16Q9UKR8 245 aa17.78■□□□□ 0.44
TVP23C-201ENST00000225576 TMEM191CA6NGB0 347 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 CYB561D2O14569 222 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 SPOPO43791 374 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 CEP104O60308 925 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 PROSCO94903 275 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 CTNNA1P35221 906 aaKnown RBP17.77■□□□□ 0.44
TVP23C-201ENST00000225576 ZNF268Q14587 947 aaPredicted RBP17.77■□□□□ 0.44
TVP23C-201ENST00000225576 UPP1Q16831 310 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 PKDCCQ504Y2 493 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 DNAJC24Q6P3W2 148 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 PDCL2Q8N4E4 241 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 C12orf29Q8N999 325 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.77■□□□□ 0.44
TVP23C-201ENST00000225576 TRIM7Q9C029 511 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 MIS12Q9H081 205 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 PCDHA3Q9Y5H8 950 aa17.77■□□□□ 0.44
TVP23C-201ENST00000225576 GABRDO14764 452 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 SETSIPP0DME0 302 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 COL6A1P12109 1028 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 MAN1A1P33908 653 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 AARSP49588 968 aaKnown RBP eCLIP17.77■□□□□ 0.439e-7■■■■■ 61.1
TVP23C-201ENST00000225576 PEX5P50542 639 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 CLCNKBP51801 687 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 PDCLQ13371 301 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 TUSC3Q13454 348 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 CLUL1Q15846 466 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 PPP1R26Q5T8A7 1209 aaPredicted RBP17.77■□□□□ 0.43
TVP23C-201ENST00000225576 ANKRD33Q7Z3H0 272 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 TMEM86AQ8N2M4 240 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 LINC01599Q8WXQ3 324 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 ALG3Q92685 438 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 TNIP3Q96KP6 325 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 SENP8Q96LD8 212 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 UROC1Q96N76 676 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 CPXM1Q96SM3 734 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 SMARCAL1Q9NZC9 954 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 EHD2Q9NZN4 543 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 IP6K2Q9UHH9 426 aa17.77■□□□□ 0.43
TVP23C-201ENST00000225576 SIGLEC16A6NMB1 481 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 PGRMC1O00264 195 aaKnown RBP17.76■□□□□ 0.43
TVP23C-201ENST00000225576 NBNO60934 754 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 POMCP01189 267 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 TUBBP07437 444 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 PFKMP08237 780 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 LMO2P25791 158 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
TVP23C-201ENST00000225576 C2orf54Q08AI8 447 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 GPNMBQ14956 572 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 GOLGA7BQ2TAP0 167 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 PLEKHG4Q58EX7 1191 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 DCAF12L1Q5VU92 463 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 GLB1LQ6UWU2 654 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 SLC39A5Q6ZMH5 540 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.76■□□□□ 0.43
TVP23C-201ENST00000225576 UBA3Q8TBC4 463 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 DPEP3Q9H4B8 488 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 HESX1Q9UBX0 185 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 TMEM59LQ9UK28 342 aa17.76■□□□□ 0.43
TVP23C-201ENST00000225576 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 PDGFRBP09619 1106 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 PSMC1P62191 440 aaKnown RBP17.75■□□□□ 0.43
TVP23C-201ENST00000225576 CYP4A22Q5TCH4 519 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 C1orf53Q5VUE5 145 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 WSCD1Q658N2 575 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 CTU1Q7Z7A3 348 aaKnown RBP17.75■□□□□ 0.43
TVP23C-201ENST00000225576 OSTM1Q86WC4 334 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 XYLT1Q86Y38 959 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 SPATA18Q8TC71 538 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 IPO4Q8TEX9 1081 aaKnown RBP17.75■□□□□ 0.43
TVP23C-201ENST00000225576 STK32AQ8WU08 396 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 KRT35Q92764 455 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 ZNF333Q96JL9 665 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 TOX2Q96NM4 488 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 PARD6BQ9BYG5 372 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 ELAC1Q9H777 363 aaKnown RBP17.75■□□□□ 0.43
TVP23C-201ENST00000225576 SYNCQ9H7C4 482 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 ANKZF1Q9H8Y5 726 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 FAM49BQ9NUQ9 324 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 CACNG4Q9UBN1 327 aa17.75■□□□□ 0.43
TVP23C-201ENST00000225576 PQBP1O60828 265 aaKnown RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 PARNO95453 639 aaKnown RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 ERBB2P04626 1255 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 IGFBP6P24592 240 aaPredicted RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 LHX1P48742 406 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 SNX16P57768 344 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 RPL7AP62424 266 aaKnown RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 CCDC70Q6NSX1 233 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 DCUN1D2Q6PH85 259 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 FBXO46Q6PJ61 603 aaPredicted RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 DSTYKQ6XUX3 929 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 TTC30AQ86WT1 665 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 CPNE8Q86YQ8 564 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 ANKRD52Q8NB46 1076 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 C3orf58Q8NDZ4 430 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 DBF4BQ8NFT6 615 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 SLC35F5Q8WV83 523 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 SEPT8Q92599 483 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms