RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 C4orf19Q8IY42 314 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 IGFLR1Q9H665 355 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 CD274Q9NZQ7 290 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 SLC25A13Q9UJS0 675 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 ITIH6Q6UXX5 1313 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 ZNF280DQ6N043 979 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 RAD9BQ6WBX8 426 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 TBC1D19Q8N5T2 526 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 SOCS4Q8WXH5 440 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 PGLYRP2Q96PD5 576 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 LRRC4BQ9NT99 713 aa19.27■□□□□ 0.68
CLIP2-201ENST00000223398 SPATA31D1Q6ZQQ2 1576 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 H0Y3Z8 333 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 TMEM253P0C7T8 217 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 EPHB3P54753 998 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 SNX31Q8N9S9 440 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 SLC4A9Q96Q91 983 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 CGRRF1Q99675 332 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 GPRC5DQ9NZD1 345 aa19.27■□□□□ 0.67
CLIP2-201ENST00000223398 SPDYE5A6NIY4 337 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 ACAT1P24752 427 aaKnown RBP19.26■□□□□ 0.67
CLIP2-201ENST00000223398 SPDYE7PQ495Y7 208 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 TRIM65Q6PJ69 517 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 REPS2Q8NFH8 660 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 CRLS1Q9UJA2 301 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 FER1L4A9Z1Z3 1794 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 IRF6O14896 467 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 PON1P27169 355 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 CASP7P55210 303 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 LONRF1Q17RB8 773 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 ANKS3Q6ZW76 656 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 BLOC1S5Q8TDH9 187 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 TASP1Q9H6P5 420 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 RNF19AQ9NV58 838 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 SUPT3HB4E1H0 165 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 AP3B1O00203 1094 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 SUPT3HO75486 399 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 HAUS5O94927 633 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 PLEKP08567 350 aaPredicted RBP19.26■□□□□ 0.67
CLIP2-201ENST00000223398 GRIK5Q16478 980 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 CXorf38Q8TB03 319 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 CIPCQ9C0C6 399 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 TRABDQ9H4I3 376 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 PCMTD2Q9NV79 361 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.26■□□□□ 0.67
CLIP2-201ENST00000223398 ACAD10Q6JQN1 1059 aa19.26■□□□□ 0.67
CLIP2-201ENST00000223398 CFAP99D6REC4 459 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 RPL10AP62906 217 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 PTPAQ15257 358 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 SAMD3Q8N6K7 520 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 TAS1R2Q8TE23 839 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 CHST12Q9NRB3 414 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 NWD1Q149M9 1564 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 FAM86B1E9PN63 330 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 ZNF189O75820 626 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 EGFRP00533 1210 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 FAM86B2P0C5J1 330 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 SLC2A3P11169 496 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 VDRP11473 427 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 MUTP22033 750 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 FBXO41Q8TF61 875 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 SRPK1Q96SB4 655 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 IDI2Q9BXS1 227 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 EML4Q9HC35 981 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 PAK5Q9P286 719 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 KLRC2P26717 231 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 POLD3Q15054 466 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 FAM96AQ9H5X1 160 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 RRP15Q9Y3B9 282 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 CNTNAP2Q9UHC6 1331 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 TADA3O75528 432 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 VIL1P09327 827 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 CD44P16070 742 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 PTGER2P43116 358 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 PSEN2P49810 448 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 C4orf33Q8N1A6 199 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 A1CFQ9NQ94 594 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 DDX43Q9NXZ2 648 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 FAM95CA0A1B0GW59 222 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 TGFB3P10600 412 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 SGO1Q5FBB7 561 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 ZNF720Q7Z2F6 126 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 TC2NQ8N9U0 490 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 KLF6Q99612 283 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 CELF4Q9BZC1 486 aaKnown RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 VPS33BQ9H267 617 aa19.25■□□□□ 0.67
CLIP2-201ENST00000223398 TRIM45Q9H8W5 580 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-201ENST00000223398 ANKRD65E5RJM6 399 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 GARTP22102 1010 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 PKN1Q16512 942 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 ARMC6Q6NXE6 501 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 C11orf96Q7Z7L8 435 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 ZNF513Q8N8E2 541 aaPredicted RBP19.24■□□□□ 0.67
CLIP2-201ENST00000223398 VTA1Q9NP79 307 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 STAT4Q14765 748 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 FAM171A1Q5VUB5 890 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 FAM198AQ9UFP1 575 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 ANGPTL2Q9UKU9 493 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms