RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MXI1P50539 228 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 CBWD6Q4V339 395 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 CBWD3Q5JTY5 395 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 CBWD5Q5RIA9 395 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 SDHAF4Q5VUM1 108 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 KRT39Q6A163 491 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 ZDHHC14Q8IZN3 488 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 ELMOD1Q8N336 334 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 STKLD1Q8NE28 680 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 GPR152Q8TDT2 470 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 GIPC2Q8TF65 315 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 ZNF512Q96ME7 567 aaPredicted RBP13.56□□□□□ -0.24
LSM5-201ENST00000223084 MED15Q96RN5 788 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 CRTAC1Q9NQ79 661 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 ARMCX3Q9UH62 379 aaPredicted RBP13.56□□□□□ -0.24
LSM5-201ENST00000223084 CDH9Q9ULB4 789 aa13.56□□□□□ -0.24
LSM5-201ENST00000223084 A8MXQ7 604 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 FAM163BP0C2L3 166 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 MYL4P12829 197 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 GJA1P17302 382 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 CEBPBP17676 345 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 ATF6P18850 670 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 CYP2F1P24903 491 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 CCR2P41597 374 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 ASPAP45381 313 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 EPHB3P54753 998 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 NOP14P78316 857 aaKnown RBP13.55□□□□□ -0.24
LSM5-201ENST00000223084 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 DPCR1Q3MIW9 517 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 IQCEQ6IPM2 695 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 FAM171BQ6P995 826 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 POTEHQ6S545 545 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 FRMD5Q7Z6J6 570 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 MLKLQ8NB16 471 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 SPPL2BQ8TCT7 592 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 C2orf15Q8WU43 125 aaKnown RBP13.55□□□□□ -0.24
LSM5-201ENST00000223084 RSAD2Q8WXG1 361 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 FGF13Q92913 245 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 SLC35C1Q96A29 364 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 MYLPFQ96A32 169 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 ZNF334Q9HCZ1 680 aaPredicted RBP13.55□□□□□ -0.24
LSM5-201ENST00000223084 RWDD2AQ9UIY3 292 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 MRPS23Q9Y3D9 190 aaKnown RBP13.55□□□□□ -0.24
LSM5-201ENST00000223084 MUC3AQ02505 3323 aa13.55□□□□□ -0.24
LSM5-201ENST00000223084 PI4K2BG5E9Z4 385 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 DCXO43602 365 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 STX10O60499 249 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 LAMP2P13473 410 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 PTPN1P18031 435 aaKnown RBP13.54□□□□□ -0.24
LSM5-201ENST00000223084 TUFMP49411 452 aaKnown RBP13.54□□□□□ -0.24
LSM5-201ENST00000223084 NLRP12P59046 1061 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 PLD1Q13393 1074 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 ORC1Q13415 861 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 NFE2Q16621 373 aaPredicted RBP13.54□□□□□ -0.24
LSM5-201ENST00000223084 DDR2Q16832 855 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 PRSS36Q5K4E3 855 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 DNAJB7Q7Z6W7 309 aaPredicted RBP13.54□□□□□ -0.24
LSM5-201ENST00000223084 SPATA2LQ8IUW3 424 aaPredicted RBP13.54□□□□□ -0.24
LSM5-201ENST00000223084 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 TAF4BQ92750 862 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 MCRS1Q96EZ8 462 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 LRRC3Q9BY71 257 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
LSM5-201ENST00000223084 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
LSM5-201ENST00000223084 ASAH2Q9NR71 780 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 RAB20Q9NX57 234 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
LSM5-201ENST00000223084 EPS15L1Q9UBC2 864 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 HSFX1Q9UBD0 423 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 HMGXB4Q9UGU5 601 aa13.54□□□□□ -0.24
LSM5-201ENST00000223084 PTPRDP23468 1912 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 CLDN5O00501 218 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 MOSPD3O75425 235 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 P4HA1P13674 534 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 BDNFP23560 247 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 NDST1P52848 882 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 CYP27A1Q02318 531 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 MTMR3Q13615 1198 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 CYP4A22Q5TCH4 519 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 PDZD4Q76G19 769 aaPredicted RBP13.53□□□□□ -0.24
LSM5-201ENST00000223084 TMC8Q8IU68 726 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 CREBRFQ8IUR6 639 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 NPAS3Q8IXF0 933 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 TATDN2Q93075 761 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 PSMG2Q969U7 264 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 PCED1BQ96HM7 432 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 NIF3L1Q9GZT8 377 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 KCNK12Q9HB15 430 aa13.53□□□□□ -0.24
LSM5-201ENST00000223084 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
LSM5-201ENST00000223084 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms