RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TAF6P49848 677 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 SEC24CP53992 1094 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 RAD23BP54727 409 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 KCNA1Q09470 495 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 NPY5RQ15761 445 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 RFX8Q6ZV50 586 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 PARP9Q8IXQ6 854 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 CENPKQ9BS16 269 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 ZFYVE28Q9HCC9 887 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 UBQLN1Q9UMX0 589 aaKnown RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 CLCN3P51790 818 aa12.02□□□□□ -0.48
NOD1-201ENST00000222823 CXCL9Q07325 125 aa12.02□□□□□ -0.48
NOD1-201ENST00000222823 CUL3Q13618 768 aa12.02□□□□□ -0.48
NOD1-201ENST00000222823 C2CD6Q53TS8 623 aa12.02□□□□□ -0.48
NOD1-201ENST00000222823 WDR59Q6PJI9 974 aa12.02□□□□□ -0.48
NOD1-201ENST00000222823 SAMD3Q8N6K7 520 aa12.02□□□□□ -0.48
NOD1-201ENST00000222823 NPHS2Q9NP85 383 aa12.02□□□□□ -0.48
NOD1-201ENST00000222823 SUPT20HL2P0C7V6 817 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 CYP2C8P10632 490 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 CYP11B1P15538 503 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 PNPLA4P41247 253 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 EZH2Q15910 746 aaKnown RBP12.02□□□□□ -0.49
NOD1-201ENST00000222823 GOLGA7BQ2TAP0 167 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 THEMIS2Q5TEJ8 643 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 IRF2BP1Q8IU81 584 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 MSL3Q8N5Y2 521 aaKnown RBP12.02□□□□□ -0.49
NOD1-201ENST00000222823 FAM71DQ8N9W8 422 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 GMCL1P1Q8NEA9 526 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 KLC4Q9NSK0 619 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.02□□□□□ -0.49
NOD1-201ENST00000222823 PCMTD2Q9NV79 361 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 GAKO14976 1311 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 POLBP06746 335 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 PDHA1P08559 390 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 ERO1BQ86YB8 467 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 DCP1BQ8IZD4 617 aaKnown RBP12.02□□□□□ -0.49
NOD1-201ENST00000222823 TAS1R2Q8TE23 839 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 WARS2Q9UGM6 360 aaKnown RBP12.02□□□□□ -0.49
NOD1-201ENST00000222823 ROBO3Q96MS0 1386 aa12.02□□□□□ -0.49
NOD1-201ENST00000222823 MTSS1O43312 755 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 GRIN3BO60391 1043 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 CYBBP04839 570 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 NCAM1P13591 858 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 EPHB2P29323 1055 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 EEF1DP29692 281 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 ALDH18A1P54886 795 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 RHBDL3P58872 404 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 HIC1Q14526 733 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 GRIK5Q16478 980 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 GLRA4Q5JXX5 417 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 C4orf19Q8IY42 314 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 SYTL5Q8TDW5 730 aaPredicted RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 MTMR12Q9C0I1 747 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 TLR2O60603 784 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 HNRNPCL1O60812 293 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 ZC3H11AO75152 810 aaKnown RBP eCLIP12.01□□□□□ -0.49
NOD1-201ENST00000222823 TFRCP02786 760 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 SETSIPP0DME0 302 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 ERFP50548 548 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 Q4G0T1 1027 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 PPIL6Q8IXY8 311 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 ACSF2Q96CM8 615 aaPredicted RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 PACSIN1Q9BY11 444 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 FRMD8Q9BZ67 464 aaPredicted RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 PABPC3Q9H361 631 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 EML4Q9HC35 981 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 OLFML3Q9NRN5 406 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 ARHGEF38Q9NXL2 777 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 SIK3Q9Y2K2 1263 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 SLC30A1Q9Y6M5 507 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 UPP2O95045 317 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 ENO1P06733 434 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 VCAM1P19320 739 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 SHMT1P34896 483 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 SV2AQ7L0J3 742 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 ERP27Q96DN0 273 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 ASPSCR1Q9BZE9 553 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 DMGDHQ9UI17 866 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 LSM7Q9UK45 103 aaKnown RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 PCDHGB4Q9UN71 923 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 NDUFS3O75489 264 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 HSD17B3P37058 310 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 OR1G1P47890 313 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 PSMC6P62333 389 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 TRADDQ15628 312 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 TBCCQ15814 346 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 MGAT5BQ3V5L5 792 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 MIIPQ5JXC2 388 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 RIBC1Q8N443 379 aaPredicted RBP12.01□□□□□ -0.49
NOD1-201ENST00000222823 SH3KBP1Q96B97 665 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 TSPAN17Q96FV3 270 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 TASP1Q9H6P5 420 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 DPP3Q9NY33 737 aa12.01□□□□□ -0.49
NOD1-201ENST00000222823 PJA2O43164 708 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms