RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ZNF408Q9H9D4 720 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 PRMT7Q9NVM4 692 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 BRD2P25440 801 aaKnown RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 PHKA2P46019 1235 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 ELF3P78545 371 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 DAB2IPQ5VWQ8 1189 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 THNSL1Q8IYQ7 743 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 CCDC89Q8N998 374 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 DYDC1Q8WWB3 177 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 BRI3BPQ8WY22 251 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 HEMGNQ9BXL5 484 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 CLEC11AQ9Y240 323 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 USP15Q9Y4E8 981 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-201ENST00000221922 IVNS1ABPQ9Y6Y0 642 aa23.42■■□□□ 1.34
CCDC9-201ENST00000221922 MGAMO43451 1857 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 B4GALT5O43286 388 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 RDXP35241 583 aaKnown RBP23.41■■□□□ 1.34
CCDC9-201ENST00000221922 FKBP1BP68106 108 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 LMNB2Q03252 620 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 LRRC14Q15048 493 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 PREPLQ4J6C6 727 aaPredicted RBP23.41■■□□□ 1.34
CCDC9-201ENST00000221922 GJC2Q5T442 439 aaPredicted RBP23.41■■□□□ 1.34
CCDC9-201ENST00000221922 WLSQ5T9L3 541 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 EEF1DP3Q658K8 133 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 SCARA3Q6AZY7 606 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 ZNF365Q70YC5 407 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 CKAP2Q8WWK9 683 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 FAXDC2Q96IV6 333 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 CDT1Q9H211 546 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 MINDY3Q9H8M7 445 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 CTNNAL1Q9UBT7 734 aa23.41■■□□□ 1.34
CCDC9-201ENST00000221922 TCRBV5S1A1TA0A578 114 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 TCP11X1B4DZS4 312 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 O00370 1275 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 ASPAP45381 313 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 NFX1Q12986 1120 aaKnown RBP23.4■■□□□ 1.34
CCDC9-201ENST00000221922 DCUN1D2Q6PH85 259 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 ZBTB10Q96DT7 871 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 NCAPGQ9BPX3 1015 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 XYLT2Q9H1B5 865 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 RPF1Q9H9Y2 349 aaKnown RBP23.4■■□□□ 1.34
CCDC9-201ENST00000221922 IFT122Q9HBG6 1241 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 STRIP2Q9ULQ0 834 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 GJC1P36383 396 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 RPL7AP62424 266 aaKnown RBP23.4■■□□□ 1.34
CCDC9-201ENST00000221922 PIGHQ14442 188 aaPredicted RBP23.4■■□□□ 1.34
CCDC9-201ENST00000221922 MAP1SQ66K74 1059 aaPredicted RBP23.4■■□□□ 1.34
CCDC9-201ENST00000221922 ERICH1Q86X53 443 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 ABCF3Q9NUQ8 709 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 FGFR1OP2Q9NVK5 253 aa23.4■■□□□ 1.34
CCDC9-201ENST00000221922 CFAP73A6NFT4 308 aa23.39■■□□□ 1.34
CCDC9-201ENST00000221922 WEE2P0C1S8 567 aa23.39■■□□□ 1.34
CCDC9-201ENST00000221922 COPS2P61201 443 aa23.39■■□□□ 1.34
CCDC9-201ENST00000221922 MPP2Q14168 576 aa23.39■■□□□ 1.34
CCDC9-201ENST00000221922 MGARPQ8TDB4 240 aa23.39■■□□□ 1.34
CCDC9-201ENST00000221922 AFG1LQ8WV93 481 aa23.39■■□□□ 1.34
CCDC9-201ENST00000221922 ZNF668Q96K58 619 aaPredicted RBP23.39■■□□□ 1.34
CCDC9-201ENST00000221922 MCEEQ96PE7 176 aa23.39■■□□□ 1.34
CCDC9-201ENST00000221922 DNAJC17Q9NVM6 304 aaKnown RBP23.39■■□□□ 1.34
CCDC9-201ENST00000221922 MED7O43513 233 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 GJB6O95452 261 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 IQCF3P0C7M6 154 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 BRAFP15056 766 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 KLRC2P26717 231 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 IGBP1P78318 339 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 ZNF394Q53GI3 561 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 SCARA5Q6ZMJ2 495 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 CEP128Q6ZU80 1094 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 CYP4X1Q8N118 509 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 CCDC63Q8NA47 563 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 CCHCR1Q8TD31 782 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 PWWP2AQ96N64 755 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 TACO1Q9BSH4 297 aaKnown RBP23.39■■□□□ 1.33
CCDC9-201ENST00000221922 FOXP3Q9BZS1 431 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 EURLQ9NYK6 297 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 ACTL7BQ9Y614 415 aa23.39■■□□□ 1.33
CCDC9-201ENST00000221922 CDH16O75309 829 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 SUN1O94901 812 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 TJP3O95049 919 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 SNAI1O95863 264 aaPredicted RBP23.38■■□□□ 1.33
CCDC9-201ENST00000221922 POLR2BP30876 1174 aaKnown RBP23.38■■□□□ 1.33
CCDC9-201ENST00000221922 ADCYAP1R1P41586 468 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 LACTBP83111 547 aaPredicted RBP23.38■■□□□ 1.33
CCDC9-201ENST00000221922 SF3A3Q12874 501 aaKnown RBP eCLIP23.38■■□□□ 1.33
CCDC9-201ENST00000221922 GALNTL6Q49A17 601 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 HIBCHQ6NVY1 386 aaPredicted RBP23.38■■□□□ 1.33
CCDC9-201ENST00000221922 NIPA2Q8N8Q9 360 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 CEP120Q8N960 986 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 SLITRK1Q96PX8 696 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 C16orf70Q9BSU1 422 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 KCNK9Q9NPC2 374 aa23.38■■□□□ 1.33
CCDC9-201ENST00000221922 DDX56Q9NY93 547 aaKnown RBP23.38■■□□□ 1.33
CCDC9-201ENST00000221922 KRT1P04264 644 aa23.37■■□□□ 1.33
CCDC9-201ENST00000221922 MCF2P10911 925 aa23.37■■□□□ 1.33
CCDC9-201ENST00000221922 PTPN7P35236 360 aa23.37■■□□□ 1.33
CCDC9-201ENST00000221922 VPS41P49754 854 aa23.37■■□□□ 1.33
CCDC9-201ENST00000221922 TNFAIP2Q03169 654 aa23.37■■□□□ 1.33
CCDC9-201ENST00000221922 MKRN3Q13064 507 aaKnown RBP23.37■■□□□ 1.33
CCDC9-201ENST00000221922 GRB14Q14449 540 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms