RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TNRC6CQ9HCJ0 1690 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 MGEA5O60502 916 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 GNRH1P01148 92 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 URODP06132 367 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CYP11B1P15538 503 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ALDH1A3P47895 512 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 DYNC1I2Q13409 638 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CUL1Q13616 776 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 MAPRE1Q15691 268 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 NAB2Q15742 525 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 DCAF6Q58WW2 860 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CYP4A22Q5TCH4 519 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 TRIM42Q8IWZ5 723 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 TRIM10Q9UDY6 481 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ITGA11Q9UKX5 1188 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ATP8A1Q9Y2Q0 1164 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 MAD1L1Q9Y6D9 718 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 GTPBP10A4D1E9 387 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 AP5Z1O43299 807 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 APOEP02649 317 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 NFICP08651 508 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 KRT7P08729 469 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 HSPA6P17066 643 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CCND3P30281 292 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CDH6P55285 790 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CCZ1BP86790 482 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CCZ1P86791 482 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 LMNB2Q03252 620 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 YWHAHQ04917 246 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 PDCLQ13371 301 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 TFDP2Q14188 446 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 TBC1D1Q86TI0 1168 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ARMC2Q8NEN0 867 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 SLC35G2Q8TBE7 412 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 MED15Q96RN5 788 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 SPON2Q9BUD6 331 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 TRPV6Q9H1D0 765 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 NXF3Q9H4D5 531 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 PADI3Q9ULW8 664 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ZBED1O96006 694 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 MMEP08473 750 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 NCKAP1LP55160 1127 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 BASP1P80723 227 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ANKRD20A4Q4UJ75 823 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ANKRD20A8PQ5CZ79 823 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ANKRD20A2Q5SQ80 823 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ANKRD20A1Q5TYW2 823 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 RHOT1Q8IXI2 618 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 TMEM199Q8N511 208 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ABTB1Q969K4 478 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 SLITRK1Q96PX8 696 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 SLC24A3Q9HC58 644 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 PFDN4Q9NQP4 134 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 FAM105AQ9NUU6 356 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 DDX43Q9NXZ2 648 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 PCDHB12Q9Y5F1 795 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 PI4K2BG5E9Z4 385 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 CAPN15O75808 1086 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ITGBL1O95965 494 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 ESRRGP62508 458 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 PTPN11Q06124 597 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 SPIRE1Q08AE8 756 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 EFHC2Q5JST6 749 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 E4F1Q66K89 784 aaPredicted RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 SLC47A2Q86VL8 602 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 RBM41Q96IZ5 413 aaKnown RBP9.88□□□□□ -0.83
CCDC113-201ENST00000219299 LCMT1Q9UIC8 334 aa9.88□□□□□ -0.83
CCDC113-201ENST00000219299 TTC36A6NLP5 189 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 F8VZ95 297 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 SPECC1L-ADORA2AF8WAN1 911 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 AMHP03971 560 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ATICP31939 592 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 SLC12A2P55011 1212 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 C17orf99Q6UX52 265 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ST13P4Q8IZP2 240 aaPredicted RBP9.87□□□□□ -0.83
CCDC113-201ENST00000219299 OR5B17Q8NGF7 314 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 KAT5Q92993 513 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 PGLYRP2Q96PD5 576 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 GOLPH3Q9H4A6 298 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 KLHL11Q9NVR0 708 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.87□□□□□ -0.83
CCDC113-201ENST00000219299 TJP3O95049 919 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 VDRP11473 427 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 NDST1P52848 882 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 CDR2Q01850 454 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ELAVL2Q12926 359 aaKnown RBP9.87□□□□□ -0.83
CCDC113-201ENST00000219299 DNAAF3Q8N9W5 541 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 SPATA20Q8TB22 786 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 TRIB2Q92519 343 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ANKRD7Q92527 254 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 KCTD10Q9H3F6 313 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ENTPD7Q9NQZ7 604 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 COL1A2P08123 1366 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 MOXD2PA6NHM9 499 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ECEL1O95672 775 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 BIRC2Q13490 618 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 C6orf118Q5T5N4 469 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ZNF280DQ6N043 979 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms