RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 FBXO36Q8NEA4 188 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 DEPDC1BQ8WUY9 529 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 HPDLQ96IR7 371 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 SLC12A6Q9UHW9 1150 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 RPTORQ8N122 1335 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 GYG2O15488 501 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 RFC1P35251 1148 aaPredicted RBP10.24□□□□□ -0.77
CSTF1-201ENST00000217109 ARFIP2P53365 341 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 PTK6Q13882 451 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 KIRREL3Q8IZU9 778 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 LMO3Q8TAP4 145 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 GRAMD1AQ96CP6 724 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 CPB2Q96IY4 423 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 ACAP3Q96P50 834 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 OSBPL7Q9BZF2 842 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 GPR88Q9GZN0 384 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 SMARCAD1Q9H4L7 1026 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 ZDHHC18Q9NUE0 388 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 G3BP2Q9UN86 482 aaKnown RBP10.24□□□□□ -0.77
CSTF1-201ENST00000217109 SMG5Q9UPR3 1016 aaKnown RBP10.24□□□□□ -0.77
CSTF1-201ENST00000217109 L3MBTL1Q9Y468 752 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 A0A1B0GUL6 1792 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 ADGRA3Q8IWK6 1321 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 CFHP08603 1231 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 MMP13P45452 471 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 TMEM132DQ14C87 1099 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 FAM47CQ5HY64 1035 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 GLRA4Q5JXX5 417 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 CDKL2Q92772 493 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 KIF9Q9HAQ2 790 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 SENP1Q9P0U3 644 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 HAO1Q9UJM8 370 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 USH1CQ9Y6N9 552 aa10.24□□□□□ -0.77
CSTF1-201ENST00000217109 DDX60Q8IY21 1712 aaKnown RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 ASAP2O43150 1006 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 CREB3O43889 395 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 VTNP04004 478 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 CCNA1P78396 465 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 PTK7Q13308 1070 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 CAPSQ13938 189 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 MDH1BQ5I0G3 518 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 PPIL6Q8IXY8 311 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 ZBTB10Q96DT7 871 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 SLC10A4Q96EP9 437 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 MYH11P35749 1972 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 DNM1LO00429 736 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 DNALI1O14645 258 aaPredicted RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 SNX3O60493 162 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 HAUS5O94927 633 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 VCPP55072 806 aaKnown RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 SESN2P58004 480 aaPredicted RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 TNFAIP2Q03169 654 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 RNASELQ05823 741 aaKnown RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 ITIH4Q14624 930 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 R3HDM1Q15032 1099 aaKnown RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 PAXIP1Q6ZW49 1069 aaPredicted RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 SDCCAG8Q86SQ7 713 aaPredicted RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 WDR49Q8IV35 697 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 PPP4R1Q8TF05 950 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 ATXN7L3BQ96GX2 97 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 SPATC1LQ9H0A9 340 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 SMYD2Q9NRG4 433 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 ZC3H7BQ9UGR2 993 aaKnown RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 H0YGN5 161 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 KCNA2P16389 499 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 ALDH5A1P51649 535 aaPredicted RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 GEMIN4P57678 1058 aaKnown RBP10.23□□□□□ -0.77
CSTF1-201ENST00000217109 MPZL3Q6UWV2 235 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 BRSK2Q8IWQ3 736 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 COPS5Q92905 334 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 WDR35Q9P2L0 1181 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 NFS1Q9Y697 457 aa10.23□□□□□ -0.77
CSTF1-201ENST00000217109 A0A087WZ62 844 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 ECHS1P30084 290 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 HIRAP54198 1017 aaPredicted RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 METTL7BQ6UX53 244 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 YTHDF3Q7Z739 585 aaKnown RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 KATNAL2Q8IYT4 538 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 CNPY4Q8N129 248 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 LRRN4Q8WUT4 740 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 FAM111AQ96PZ2 611 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 NUDCD1Q96RS6 583 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 FDXACB1Q9BRP7 624 aaPredicted RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 TELO2Q9Y4R8 837 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 SRCAPQ6ZRS2 3230 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 NAV1Q8NEY1 1877 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 E2F8A0AVK6 867 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 NQO1P15559 274 aaKnown RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 ZNF200P98182 395 aaPredicted RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 DENND1BQ6P3S1 775 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 ABHD15Q6UXT9 468 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 HIPK4Q8NE63 616 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 PPP1R13LQ8WUF5 828 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 VCPIP1Q96JH7 1222 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 MAGEB18Q96M61 343 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms