RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TSPAN16Q9UKR8 245 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TCRBV5S1A1TA0A578 114 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MIF4GDA9UHW6 222 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 HCRTO43612 131 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 FGFR1P11362 822 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 OAS2P29728 719 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 GPD2P43304 727 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CLCNKBP51801 687 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 LCLAT1Q6UWP7 414 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ZNF598Q86UK7 904 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RTN4RL1Q86UN2 441 aaPredicted RBP20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 KRT35Q92764 455 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PGBD4Q96DM1 585 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RGS18Q9NS28 235 aa20.84■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TANC1Q9C0D5 1861 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 A8MXQ7 604 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MYO1FO00160 1098 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 GJB6O95452 261 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 SKIP12755 728 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 MARCKSL1P49006 195 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 RNASE9P60153 205 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 PPP1R26Q5T8A7 1209 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CYP4A22Q5TCH4 519 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ECHDC2Q86YB7 292 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 ACTRT1Q8TDG2 376 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CPXM1Q96SM3 734 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 CARD9Q9H257 536 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 DPEP3Q9H4B8 488 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TJP2Q9UDY2 1190 aa20.83■□□□□ 0.93
TNFRSF1A-201ENST00000162749 TARSL2A2RTX5 802 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SPOPO43791 374 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CEP104O60308 925 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 HUS1O60921 280 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SELPP16109 830 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 RPL7AP62424 266 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 LINC01599Q8WXQ3 324 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PAAF1Q9BRP4 392 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SELENOOQ9BVL4 669 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 C9IYK1 514 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 H3BQF6 201 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 POLR3GO15318 223 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 POMCP01189 267 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 LMO2P25791 158 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GNL1P36915 607 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 STILQ15468 1287 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ADGRF2Q8IZF7 708 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 RASGEF1CQ8N431 466 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TOP6BLQ8N6T0 577 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 C3orf20Q8ND61 904 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 C3orf58Q8NDZ4 430 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 RBM12Q9NTZ6 932 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 FAM49BQ9NUQ9 324 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 STRIP2Q9ULQ0 834 aa20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TSC2P49815 1807 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CASTOR2A6NHX0 329 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PODXLO00592 558 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CTNNA1P35221 906 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PEX5P50542 639 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PDCLQ13371 301 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 UBL4BQ8N7F7 174 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 UBA3Q8TBC4 463 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 FEZF2Q8TBJ5 459 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 WNT8AQ9H1J5 351 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 UBN1Q9NPG3 1134 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PDGFRBP09619 1106 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 BFSP2Q13515 415 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CASP8Q14790 479 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 UPP1Q16831 310 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PPP1R15BQ5SWA1 713 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 DNAJC24Q6P3W2 148 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SLC24A5Q71RS6 500 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 MMGT1Q8N4V1 131 aa20.81■□□□□ 0.92
TNFRSF1A-201ENST00000162749 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.923e-6■■■□□ 18.5
TNFRSF1A-201ENST00000162749 TTC3P53804 2025 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PGRMC1O00264 195 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CYB561D2O14569 222 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 NBNO60934 754 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ZMYND10O75800 440 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PROSCO94903 275 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PFKMP08237 780 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GPNMBQ14956 572 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PKDCCQ504Y2 493 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CRYBG2Q8N1P7 616 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 C18orf8Q96DM3 657 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 LPIN3Q9BQK8 851 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 INPP5FQ9Y2H2 1132 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CCDC66A2RUB6 948 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TMEM191CA6NGB0 347 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PQBP1O60828 265 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ERBB2P04626 1255 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 RPL9P32969 192 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GRIK3Q13003 919 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GOLGA7BQ2TAP0 167 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TTC30AQ86WT1 665 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 RNPC3Q96LT9 517 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 MCEEQ96PE7 176 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SNX25Q9H3E2 840 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TMEM59LQ9UK28 342 aa20.8■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PCDHA3Q9Y5H8 950 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms