RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CDC42EP4Q9H3Q1 356 aaKnown RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 RABEP2Q9H5N1 569 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 ANAPC5Q9UJX4 755 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 AGAP1Q9UPQ3 857 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 RRP15Q9Y3B9 282 aaKnown RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SIGLEC16A6NMB1 481 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 RASGRF2O14827 1237 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 MICAL2O94851 1124 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 AGTP01019 485 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 VDRP11473 427 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 HOXD8P13378 290 aaPredicted RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SMPD1P17405 629 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 ATP5DP30049 168 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 RDXP35241 583 aaKnown RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 GRM5P41594 1212 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 CDH8P55286 799 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 CDC42EP1Q00587 391 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 OGDHQ02218 1023 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 MYO1EQ12965 1108 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 ORC1Q13415 861 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SLC10A6Q3KNW5 377 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 IZUMO3Q5VZ72 239 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 IQSEC1Q6DN90 963 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 MFSD7Q6UXD7 560 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 B4GALNT4Q76KP1 1039 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 TAOK1Q7L7X3 1001 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 KIAA0319LQ8IZA0 1049 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 WDTC1Q8N5D0 677 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 C2orf69Q8N8R5 385 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SLC4A11Q8NBS3 891 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 TLCD1Q96CP7 247 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 TMEM109Q9BVC6 243 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 GCOM2Q9BZD3 368 aaPredicted RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 METTL5Q9NRN9 209 aaKnown RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 DPP3Q9NY33 737 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SLC12A6Q9UHW9 1150 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 BARX2Q9UMQ3 279 aaPredicted RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF148Q9UQR1 794 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 GINS2Q9Y248 185 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SRCAPQ6ZRS2 3230 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF236Q9UL36 1845 aa8.71□□□□□ -1.01
VAMP3-201ENST00000054666 A0A1B0GUA9 196 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 E7EVH7 732 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 LIASO43766 372 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 ACSL3O95573 720 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 STAU1O95793 577 aaKnown RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 HMGCRP04035 888 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 KRT10P13645 584 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 STILQ15468 1287 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 DRICH1Q6PGQ1 229 aaPredicted RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 RHBDF2Q6PJF5 856 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 MICALCLQ6ZW33 695 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 ILDR2Q71H61 639 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 DPH6Q7L8W6 267 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 CATSPER4Q7RTX7 472 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 SPATS2Q86XZ4 545 aaKnown RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 UHMK1Q8TAS1 419 aaKnown RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 HEXIM2Q96MH2 286 aaKnown RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 FAM118BQ9BPY3 351 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 SELENOSQ9BQE4 189 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 FOXP3Q9BZS1 431 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 ROPN1BQ9BZX4 212 aaPredicted RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 ELOVL4Q9GZR5 314 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 FAM49AQ9H0Q0 323 aaPredicted RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 SDCBP2Q9H190 292 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 ROPN1Q9HAT0 212 aaPredicted RBP8.71□□□□□ -1.02
VAMP3-201ENST00000054666 RALGAPA2Q2PPJ7 1873 aa8.71□□□□□ -1.02
VAMP3-201ENST00000054666 hCG_1818297A0A087WSY0 165 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 SLC15A5A6NIM6 579 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 RNF8O76064 485 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 NPTXRO95502 500 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 TCF4P15884 667 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 DESP17661 470 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 RFC1P35251 1148 aaPredicted RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 INCA1Q0VD86 236 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 ZNF268Q14587 947 aaPredicted RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 KIZQ2M2Z5 673 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 ATP13A4Q4VNC1 1196 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 FAM102AQ5T9C2 384 aaPredicted RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 NLRP14Q86W24 1093 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 XYLT1Q86Y38 959 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 TTC13Q8NBP0 860 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 EPS8L3Q8TE67 593 aaKnown RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 TWNKQ96RR1 684 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 CPXM1Q96SM3 734 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 NT5C1AQ9BXI3 368 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 FRMD8P1Q9BZ68 369 aaPredicted RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 TRIM6Q9C030 488 aaPredicted RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 ZWILCHQ9H900 591 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 PPANQ9NQ55 473 aaKnown RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 HMGXB4Q9UGU5 601 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 KIAA1257Q9ULG3 409 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 DERAQ9Y315 318 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 DCDC2CA8MYV0 355 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 LRCH4O75427 683 aa8.7□□□□□ -1.02
VAMP3-201ENST00000054666 CELF2O95319 508 aaKnown RBP8.7□□□□□ -1.02
VAMP3-201ENST00000054666 FAM107AO95990 144 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms