RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MMP8P22894 467 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 CDKN2BP42772 138 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 CPA2P48052 419 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 OTUD4Q01804 1114 aaKnown RBP14.75□□□□□ -0.05
USH1C-201ENST00000005226 THEMIS2Q5TEJ8 643 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 IGDCC3Q8IVU1 814 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 TMEM130Q8N3G9 435 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 ARMC2Q8NEN0 867 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 ACTL9Q8TC94 416 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 UCMAQ8WVF2 138 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 CPT1BQ92523 772 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 SYT15Q9BQS2 421 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 GINM1Q9NU53 330 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 ATP4AP20648 1035 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 MARK3P27448 753 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 SERPINB3P29508 390 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 KPNB1Q14974 876 aaKnown RBP14.75□□□□□ -0.05
USH1C-201ENST00000005226 SLC45A4Q5BKX6 768 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 EFHC2Q5JST6 749 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 DNAJC24Q6P3W2 148 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 ARMCX1Q9P291 453 aa14.75□□□□□ -0.05
USH1C-201ENST00000005226 LRRIQ4A6NIV6 560 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 C2CD2LO14523 706 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 WEE2P0C1S8 567 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 NEFHP12036 1026 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 SFNP31947 248 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 RPL22P35268 128 aaKnown RBP14.74□□□□□ -0.05
USH1C-201ENST00000005226 HIRAP54198 1017 aaPredicted RBP14.74□□□□□ -0.05
USH1C-201ENST00000005226 PRKCEQ02156 737 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
USH1C-201ENST00000005226 FYB2Q5VWT5 728 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 SCARA5Q6ZMJ2 495 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 C4orf50Q6ZRC1 276 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 RINLQ6ZS11 566 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 UNC45BQ8IWX7 931 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 PALM2Q8IXS6 379 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 ZNF483Q8TF39 744 aaPredicted RBP14.74□□□□□ -0.05
USH1C-201ENST00000005226 NRG4Q8WWG1 115 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 DNAJC9Q8WXX5 260 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 TTC17Q96AE7 1141 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 MANSC1Q9H8J5 431 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 ARHGAP28Q9P2N2 729 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 FBXO40Q9UH90 709 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 CHMP2BQ9UQN3 213 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 LOXHD1Q8IVV2 1947 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 ATP2A1O14983 1001 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 CST8O60676 142 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 TMEM63AO94886 807 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 RCN1Q15293 331 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 TAF5Q15542 800 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 TFDP3Q5H9I0 405 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 WDTC1Q8N5D0 677 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 WDR60Q8WVS4 1066 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 ZBTB10Q96DT7 871 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 SERAC1Q96JX3 654 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 SLC38A10Q9HBR0 1119 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 PDLIM7Q9NR12 457 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 CYP26B1Q9NR63 512 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 PCSK1NQ9UHG2 260 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 SLC24A2Q9UI40 661 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 AGTPBP1Q9UPW5 1226 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 CTDP1Q9Y5B0 961 aaPredicted RBP14.74□□□□□ -0.05
USH1C-201ENST00000005226 KAT6AQ92794 2004 aa14.74□□□□□ -0.05
USH1C-201ENST00000005226 MYH9P35579 1960 aaKnown RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 FAM155BO75949 473 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 RGS20O76081 388 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ATP6V1C1P21283 382 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 BGNP21810 368 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 IL1R2P27930 398 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 TNFSF9P41273 254 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ZBTB16Q05516 673 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ORC1Q13415 861 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 NCOA4Q13772 614 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 CCDC6Q16204 474 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 MUM1Q2TAK8 710 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ACSBG2Q5FVE4 666 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 MDH1BQ5I0G3 518 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 WASHC2DQ5SRD0 308 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ZBTB33Q86T24 672 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 EMC1Q8N766 993 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 ENDOVQ8N8Q3 282 aaKnown RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 TFAP2BQ92481 460 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 FAM111AQ96PZ2 611 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 MSTO1Q9BUK6 570 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 PIDD1Q9HB75 910 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 DRG1Q9Y295 367 aaKnown RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 PPP1R12AO14974 1030 aaPredicted RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 AVILO75366 819 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 LUC7L3O95232 432 aaKnown RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 NR3C2P08235 984 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
USH1C-201ENST00000005226 RFC1P35251 1148 aaPredicted RBP14.73□□□□□ -0.05
USH1C-201ENST00000005226 RASSF2P50749 326 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 GNPTABQ3T906 1256 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 GPAT2Q6NUI2 795 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 TMEM154Q6P9G4 183 aa14.73□□□□□ -0.05
USH1C-201ENST00000005226 TRIM72Q6ZMU5 477 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms