RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Tigd4Q8BUZ3 513 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 GrapQ9CX99 217 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nfu1Q9QZ23 255 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Slc22a3Q9WTW5 551 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Shcbp1Q9Z179 668 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mtmr9Q9Z2D0 545 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 1700011I03RikE9PYL8 271 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Adam7O35227 789 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rag1P15919 1040 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 PorP37040 678 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Hspa9P38647 679 aaKnown RBP9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Cyp2c37P56654 490 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rps6P62754 249 aaKnown RBP9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ppp4cP97470 307 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Zfp956Q3UZY6 572 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Trpc1Q61056 793 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Dmc1Q61880 340 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Lrig3Q6P1C6 1117 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tas2r109Q7M707 316 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Plac9Q8K262 108 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 MyripQ8K3I4 856 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 TraipQ8VIG6 470 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Serpini2Q9JK88 405 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Atp11cQ9QZW0 1129 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Foxm1O08696 760 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Cyp2j6O54750 501 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 ArP19091 899 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Arf5P84084 180 aaKnown RBP9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 SpoplQ2M2N2 392 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Arhgap17Q3UIA2 846 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Atp4aQ64436 1033 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ip6k2Q80V72 448 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Slx1bQ8BX32 270 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Afg3l2Q8JZQ2 802 aaKnown RBP9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Pdk2Q9JK42 407 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 NumbQ9QZS3 653 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Dlg5E9Q9R9 1921 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 AspgA0JNU3 564 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Fam47eD3YWC7 402 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Slc6a15Q8BG16 729 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Scfd2Q8BTY8 684 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 OplahQ8K010 1288 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Vmn1r218Q8R261 298 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ndufs2Q91WD5 463 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ccdc22Q9JIG7 627 aa9.61□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3252E9PUT9 216 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm2956E9PVJ0 216 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3002E9PW72 216 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3468E9QAJ8 216 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm8108K7N734 216 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3739L7N296 216 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3164L7N2B9 238 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3488M0QW81 238 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Kcnu1O54982 1121 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Serpina1aP07758 413 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Serpina1cQ00896 412 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Serpina1dQ00897 413 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mark3Q03141 753 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Q3TQQ9 903 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Hif1aQ61221 836 aaKnown RBP9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Luzp2Q8BGY3 345 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Frmd4aQ8BIE6 1020 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rhpn2Q8BWR8 686 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ifi205aQ8CGE8 404 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tesk2Q8VCT9 570 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tex12Q9CR81 123 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nudt5Q9JKX6 218 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tnfrsf10bQ9QZM4 381 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rab23P35288 237 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Map4k1P70218 827 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Dab1P97318 588 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Trmt1Q3TX08 663 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Capn13Q3UW68 665 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Dph1Q5NCQ5 438 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Iqcf4Q6P8Y2 204 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Uba3Q8C878 462 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Alas1Q8VC19 642 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Olfr1414Q8VGU5 312 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Itgb1bp2Q9R000 350 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 4931408C20RikE9PWP9 1381 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm1141B9EJU1 475 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Plekha5E9Q6H8 1269 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ccdc149F6V035 524 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 PtenO08586 403 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Magea6O89010 325 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mboat4P0C7A3 435 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ankrd34bQ3UUF8 508 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Klra7Q60654 280 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Magea3Q6T340 320 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Dusp4Q8BFV3 398 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tgif2lx2Q8K5B9 231 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Stard7Q8R1R3 373 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Olfr397Q8VEZ6 315 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Bzw1Q9CQC6 419 aaKnown RBP9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Exo5Q9CXP9 373 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tcea2Q9QVN7 299 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Smok2bQ9QYZ3 484 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Smok2aQ9QYZ6 504 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Morf4l2Q9R0Q4 288 aa9.6□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Atp8b5A3FIN4 1183 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms