RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Gstt4Q9D4P7 240 aa13.15□□□□□ -0.3
Trim50-202ENSMUST00000111180 Pdzd4Q9QY39 772 aa13.15□□□□□ -0.3
Trim50-202ENSMUST00000111180 Atp2c2A7L9Z8 944 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Hsd17b14E9Q3D4 273 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 CaluO35887 315 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Nr3c1P06537 783 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Mgat1P27808 447 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Adcyap1r1P70205 496 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Cdh8P97291 799 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 ArvcfP98203 962 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Prdx5P99029 210 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Smpd1Q04519 627 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ect2Q07139 913 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Cd163Q2VLH6 1121 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 SpdyaQ5IBH7 310 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Zfp658Q5PPQ4 887 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Stip1Q60864 543 aaKnown RBP13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Cct6bQ61390 531 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Q6GQV0 436 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Zfyve28Q6ZPK7 905 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Tubb2aQ7TMM9 445 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Cct8l1Q80YT3 562 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Q80ZQ3 298 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Fam163bQ8BUM6 167 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Brat1Q8C3R1 822 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 LgsnQ8CIX8 563 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Il17cQ8K4C5 194 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ugt2b1Q8R084 529 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 MiosQ8VE19 875 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ube2sQ921J4 223 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Spg21Q9CQC8 308 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Tubb2bQ9CWF2 445 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Grb14Q9JLM9 538 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 Sfmbt1Q9JMD1 863 aa13.14□□□□□ -0.31
Trim50-202ENSMUST00000111180 EloblA6PWE0 161 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Stk10O55098 966 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Pja1O55176 578 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Xirp1O70373 1129 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Vti1aO89116 217 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Pth1rP41593 591 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Shmt1P50431 478 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 UrosP51163 265 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Pou6f1Q07916 301 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Plpp4Q0VBU9 271 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Nxf2Q4ZGD8 691 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Usp17laQ61068 526 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Akap7Q7TN79 314 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Olfr538Q7TRT5 310 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ints2Q80UK8 1198 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Slc38a9Q8BGD6 560 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 SowahaQ8BLS7 548 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Lig4Q8BTF7 911 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Amz1Q8BVF9 502 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Csnk1g3Q8C4X2 424 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Nup58Q8R332 587 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Bbs5Q9CZQ9 341 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Fam187aQ9D3R5 417 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Spata17Q9D552 379 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ccdc91Q9D8L5 442 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Doc2gQ9ESN1 387 aa13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Gtf2ird1Q9JI57 1104 aaKnown RBP13.13□□□□□ -0.31
Trim50-202ENSMUST00000111180 Zfp236S4R299 1847 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Olfr391-psA0A0U1RNJ4 312 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Gm6657A0A1B0GRJ3 277 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Gm2030D3Z7C4 212 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Apol11aE9PZG0 334 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Prr22F6TNE3 422 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Bcl7cO08664 217 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ifnb1P01575 182 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Rrm1P07742 792 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Lhx5P61375 402 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Smyd1P97443 490 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Nhlh1Q02576 133 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Krt35Q497I4 455 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Tbc1d1Q60949 1255 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Sema5aQ62217 1077 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 CochQ62507 552 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Papd5Q68ED3 633 aaKnown RBP13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Wdr44Q6NVE8 915 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Q6P2K3 674 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Tlr11Q6R5P0 926 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Cd300lfQ6SJQ7 337 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ppm1eQ80TL0 749 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Mical2Q8BML1 960 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Nipal1Q8BMW7 416 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Kank2Q8BX02 843 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ttc16Q8C1F5 767 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Tmem132cQ8CEF9 1099 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Lrrc66Q8K0B3 872 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Znf830Q8R1N0 363 aaKnown RBP13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 EpgnQ924X1 152 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Tpgs1Q99MS8 303 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Llcfc1Q9D9P8 108 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 EmcnQ9R0H2 261 aa13.12□□□□□ -0.31
Trim50-202ENSMUST00000111180 Btbd18A0A0A6YY25 723 aa13.11□□□□□ -0.31
Trim50-202ENSMUST00000111180 Gm12394A2AKP6 982 aa13.11□□□□□ -0.31
Trim50-202ENSMUST00000111180 1700001O22RikA2APZ1 375 aa13.11□□□□□ -0.31
Trim50-202ENSMUST00000111180 Mup10A2BIN1 180 aa13.11□□□□□ -0.31
Trim50-202ENSMUST00000111180 Mup14A2CEK7 180 aa13.11□□□□□ -0.31
Trim50-202ENSMUST00000111180 Dennd5bA2RSQ0 1274 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms