RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Snrnp25Q8VIK1 123 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Q922C1 641 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Tpgs1Q99MS8 303 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 MutyhQ99P21 515 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 GarsQ9CZD3 729 aaKnown RBP22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Fbxo17Q9QZM8 286 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Pacsin2Q9WVE8 486 aaKnown RBP22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Zscan4-ps1A0A1C7CYV3 506 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Zscan4dA7KBS4 506 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Lrrc73B2RWC4 316 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Xpnpep3B7ZMP1 506 aaKnown RBP22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Stk10O55098 966 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Klra1P20937 262 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gjb3P28231 270 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ugt1a2P70691 533 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Tmprss15P97435 1069 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Zscan4fQ3URS2 506 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ugt1a1Q63886 535 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 AdalQ80SY6 360 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Zscan4cQ80VJ6 506 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Arhgap11aQ80Y19 987 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Castor2Q8CAB8 329 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Q8CEZ4 452 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 GOLGA7BQ9D428 167 aa22.39■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ctnnd1P30999 938 aaKnown RBP22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Bpifa6Q0VGU8 367 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Entpd7Q3TCT4 606 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Sppl2bQ3TD49 578 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 PostnQ62009 838 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 EmsyQ8BMB0 1264 aaKnown RBP22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 LarsQ8BMJ2 1178 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Uba3Q8C878 462 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Lrrc66Q8K0B3 872 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Fam49bQ921M7 324 aa22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Xab2Q9DCD2 855 aaKnown RBP22.38■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Dennd5bA2RSQ0 1274 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Arhgef26D3YYY8 869 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Olfr1354E9Q5G9 310 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Farp1F8VPU2 1048 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rdh7O88451 316 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Cdc6O89033 562 aaKnown RBP22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mucl2P02815 138 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Nr2c2P49117 596 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Vps51Q3UVL4 782 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 PighQ5M9N4 188 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ccdc157Q5SPX1 718 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Crb2Q80YA8 1282 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Fam163bQ8BUM6 167 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Sept8Q8CHH9 429 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Epn2Q8CHU3 595 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gtf2ird1Q9JI57 1104 aaKnown RBP22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Tnni1Q9WUZ5 187 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gm8369E9PZI3 166 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Lmo2P25801 158 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mxi1P50540 228 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Usp17laQ61068 526 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ctnna2Q61301 953 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Spag5Q7TME2 1165 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Slc2a12Q8BFW9 622 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Wdr35Q8BND3 1181 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Parp10Q8CIE4 960 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 LgsnQ8CIX8 563 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 UvragQ8K245 698 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mcoln2Q8K595 566 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Timd2Q8R183 305 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Eml3Q8VC03 897 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rbm10Q99KG3 930 aaKnown RBP22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mis12Q9CY25 206 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rasgef1cQ9D300 466 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Cpne8Q9DC53 577 aa22.37■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Lrrc74aA0A1Y7VMD6 494 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Akap17bA2A3V1 959 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Prdm15E9Q8T2 1174 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gpr25P0C5I1 358 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Art2aP17981 287 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Pde6bP23440 856 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ctnna1P26231 906 aaKnown RBP22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gdf6P43028 454 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Wdr41Q3UDP0 460 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Tas2r125Q7M710 311 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Smoc2Q8CD91 447 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ca12Q8CI85 354 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 PhykplQ8R1K4 467 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 GhdcQ99J23 532 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 NamptQ99KQ4 491 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Scgb2b20Q9JI02 112 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Atp1a4Q9WV27 1032 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rasgrp1Q9Z1S3 795 aa22.36■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 1700001O22RikA2APZ1 375 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Cyp2b13A6H6J2 491 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rpl7aP12970 266 aaKnown RBP22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Foxp2P58463 714 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Psmc1P62192 440 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 GscQ02591 256 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Cyp2j11Q3UNV2 504 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Traf3Q60803 567 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Kiaa1841Q68FF0 718 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Camta2Q80Y50 1208 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Fbxw21Q8BI38 468 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mmgt1Q8K273 131 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms